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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5962  (registered. 2012)
Contig Information
Length 941 bp
Clones alternative view 127 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 6
Wh_dL Crown of seedling 4
Wh_e Seed DPA10 1
Wh_h Spike at heading date 2
Wh_r Root 2
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 3
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_OKCS Seed DPA5 2
Wh_SHC Shoot grown with cold treatment 1
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VSCB Liquid cultured tissue 5
Wh_VWD Shoot grown with dessication 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 5
WH_XN Leaves, plant was grown at constant 23℃ 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XT Roots, 18 day old plants were grown hydroponically 9
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_SP 2
WH_XA Root 14
WH_XB Root 5
WH_XC Root, treated at 50 microM Al for 6h 15
WH_XD Root, treated at 50 microM Al for 6h 12
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|57471724|gb|AAW50993.1|| ribosomal protein S7 [Triticum aestivum]
Score 382
Evalue 4.00E-104
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5962 
GCTGCTGCTGTTTGTCGTACATAAATCGTACAATCTTGGTCTTACATGTAGCAACGCTCAATTAGAAATGACAATCAAGTGCAACAAGATAACCGAGCAG
AGGTTCATAATTTAAATGCTCAAAACTTTAACATTGTTCACGTTCATTGCCAATCTCCATCAAACTTCCTAACCCCAGATCGTTAACAAAACTATGTTTC
TGGAATACATTGATAGCACAACTAACTGAGACCTCGACCAAAACATTCGGATCAGAAAGATATGAAAATGGAGACATAAGGCATGGATCTTCAGGCGGTT
TCAGTCACAGGGTACTCAAAGACAACGTCTTTCCCACAAAGCCTGCGGTAGACTGCAGAGAAGGTCTCCAGCTTGTATTCAGTGTTGTTGCGCTCCTTTG
GGTCCAAGTAGATCTTGATGACCTTGGCACCATCCAAACGGTATCTGACACGCTTCCCCACAATCTCAGCTGGGTACACGACATCCTCCAAGATACCATC
ATGAACAGCTGTCAGGGTCCTGGTGCGAGGGCGCTGAACAGCAGAACCCTTCTTGGGTGGCCTCACAATCCTTCTTGTTGCAACAAAGACAACATCCTTG
CCGCTAAACTTCTTCTCCAGCTCCCTGACGAGCCTGACATGGATCTTCCTGAAGGGCTTGCGCAGACGGTACGGCACATGGATCACCACGGCCTTCCTGT
TGCCAACAACATCCATCTGGATTGCAGTGTTGATGTACAGGTCCTTGAGGTCGCTCTTGAGCTCCTGGTTGCCATTCTCCAGGTCAAAGAAAGCCTGCGC
AACGGTGTCCTCGAACTCGGAGGGCTCGACGCCCTTGTCCTTCTGGATCTTCTTCCTGGCGGTGTACATCTTGCTTCCCTTTCGCCGGGCCCTGCGCGCG
AGGAGACGAGGGAGCAGAGAAGTGGAGGCGCCGGCCTCGTG
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