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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig7054  (registered. 2012)
Contig Information
Length 1598 bp
Clones alternative view 58 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 4
Wh_h Spike at heading date 3
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_PCDAM Anther at meiosis 2
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 5
Wh_VABA Shoot with ABA treatment 2
Wh_VHS Shoot with heat shock treatment 2
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 2
WH_XF Seedling, infected with leaf rust 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 10
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
WH_F/WH_R 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|23954355|emb|CAD54079.1|| metallothioneine type2 [Hordeum vulgare subsp. vulgare]
Score 177
Evalue 3.00E-42
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig7054 
GATAATTTGGCTTGACCATGAGACCTTAATGTATTTTTTTAATAAGACGCATAAGATAGACCGATCAATAAATCCTGCAAGATACACATACCGTCGTGTC
TTGTTGAGATCCACCTTTTGCAAATAAATTCCTGCACTATATTTCGAGATGGATAGGAATAAACCACAAAACAAGGTACAGTCTGATACAACACTCGGCA
ACAGAAGAAGAAAATACTGCCGCACATGGAACCATAGAGAAGAGGAAAACGACAGTTTGAGGAGAAGACCAAGAACAAAAGACCGGCCTCTGATCCTGCT
AGTGCATAAGAAGAACCCGAAAGCAACACTAATAGGAGGAGGATCTAACTTTTTTTTTTAAGCAAAACCACGGGAGATTTTATTTAGGGGTTTACATGCA
TGGAATGGCACCCGCTCTGCTCATGCAGGCAGGTGCGTACATACTACATACATACAAAGACCCTCGATCAGGTGGCATTACATGGTAGTAGATGGATACG
TAGATCATAGATATGATGCACGCGGCGCATGCATGATCAATGATCTAGCAGCTGCAGCAGGAGCAGCCGCAGCTGGTGCCGCACTTGCACTGGGTGCAGC
CGCAGCCGCCGTTCTCGGCCGCCATCTCCATGCCGCCGGAGCTCCCCTTGTGAGTGGCAGTGGCGGAGACGAGGAGGGTGGCGCCGGCGGCCTCAACCTC
GGGGTACATGTTGCAGCCACCGCAGCCGTTGCCGCACTTGCAGGCGGTGCCGCATCCGCAGTTTCCTCCGCAGCAAGACATATTCGAGGTTGCTTGGGCT
TGGATGGAGGCCTTGATTGGTGTTGGCTAGGAGCTTCCTGTGTGCTTCTTGCCCTTGCGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAA
GCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCAAATAGGTCAACCTTTTAAACTGCCTGCTGAATCCATGAGCAGGCAAGA
GACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTG
AAAACGGGGTTGTGGGAGAGCAATACAAGCGTTGTGCTGCTAGGCGAAGCGGTTGAGTGCCGCACCCTAGATGGCTAAAGTCCAGTAGCCGAAAGCATCA
CTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAG
CGAAGTAGTACCGTGAGGGAAAGGTGAAAAGAACCCCCAGTGGGTAGTGAAATAGAACGTGAAACCGTGCTGAGCTCCCATCTCATGGGATCTCAACTGG
CTATCCCCGTATAGCACATCCTCCATCACCAACATTAACTGCACAGAGGTTGTTAAGGGAGCAGCAGGATGATGAGTATCTTGCAGCCCTCCAAGCTGAT
AGAGAAAAAGAGTTGAAGGCTGTGGAGGATGCTGAGCTCCGTAGATTAGAAGAAGCTGCTGCANNNGAAGCTGCTATTGAAATGGAAAAGCAAAAGAA
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