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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig9536  (registered. 2012)
Contig Information
Length 1192 bp
Clones alternative view 113 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 5
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 4
Wh_h Spike at heading date 2
Wh_oh Pistil at heading date 6
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 3
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 1
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 9
Wh_RDr Root of dessiccated seed 2
Wh_SHDr Shoot grown with dessication 1
Wh_V483 Shoot grown under cold condition for 3days 3
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 3
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 4
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 6
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_SP 2
WH_XA Root 6
WH_XB Root 10
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|399414|sp|Q03033.1|EF1A_WHEAT|EF1A_WHEAT RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha
Score 623
Evalue 1.00E-176
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig9536 
TTTTTTTTTTACACAGATAAAATGCAACAAGCTAGTATTAAAAGACACAAACCAGGTCTCATAACATCCAGGTTTCACCAAAGCTTACATTAGGACAGTA
TGTAAGGCACAAGACAGACACCACCAAGGGCACGATATGCAGCGCTAACAGCTGAACAGCTAAAATATACCCAGTACGAACAATGCCCTTAACAAAACTC
AGCCAATACTAAAAACTGCTTGGTGTCTGAAACAGTGATTTGGATATCAATTGTGGAATTACTTCTTCTTGATGGCAGCCTTGGTCACCTTGGCCCCGGT
TGGGTCCTTCTTCTCAACGCCCTTGATGACACCAACAGCCACAGTCTGCCTCATGTCACGGACAGCAAAACGACCAAGAGGAGGGTAAGTGGCAAAGGTC
TCCACAACCATGGGCTTGGTGGGAATCATCTTCACTATGCCAGCATCACCATTCTTGAGGAACTTGGGCAGGGCCTCCAGCTCCTTACCAGACCGCCTGT
CGATCTTGGTCACCAGCTCAGCAAACTTGACAGCAATGTGTGAGGTGTGGCAGTCCAGCACTGGGGCGTAGCCGTTGCCAATCTGACCAGGGTGGTTCAT
GATGATGACCTGGGAGGTGAAGTTGGCTGCCTCCTTGGCAGGGTCATCCTTGGAGTTGGATGCAACAAACCCACGCTTCAGATCCTTCACGGCAACGTTC
TTGACGTTGAAGCCAACGTTGTCACCAGGAAGCGCCTCCAGGAGAGACTCATGGTGCATCTCAACGGACTTGACCTCAGTTGTCAGACCAGTGGGACCAA
AGGTAACAACCATACCAGGCTTGATGACACCAGTCTCAACACGGCCAACAGGCACAGTTCCAATGCCACCAATCTTGTAAACATCCTGTAGGGGAAGACG
GAGGGGCTTGTCTGAGGGCCTCTTGGGCTCGTTGATCTGGTCAAGTGCCTCAAGCAGGGTTGGGCCCTTGTACCAGTCAAGGTTGGTGGACCTCTCAATC
ATGTTGTCACCCTCGAACCCAGAGATGGGGACGAAGGGAACCTTGTCAGGGTTGTAGCCGACCTTCTTCAGGTACGAAGAGACCTCCTTAACAATTTCTT
CGTAACGAGCCTTCGAGTACTTGGGAGTGGTGGCGTCCATCTTGTTGCAGCAGCAGATCATCTGCTTCACTCCAAGAGTGAAAGCAAGGAGG
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