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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig8773  (registered. 2012)
Contig Information
Length 848 bp
Clones alternative view 82 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 3
Wh_r Root 5
Wh_yd Spikelet at late flowering 1
Wh_EM Dormant seed with water absorption 2
Wh_PCDAM Anther at meiosis 2
Wh_SHC Shoot grown with cold treatment 6
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 1
Wh_VWD Shoot grown with dessication 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 4
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 7
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 6
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 4
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XA Root 6
WH_XB Root 5
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 7
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|226492497|ref|NP_001146962.1|| hypothetical protein LOC100280571 [Zea mays]
Score 309
Evalue 2.00E-82
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig8773 
TTTTTTTTTTAAAGCACAAAAAATTGCAACGGGTTTTTTTTTTAAGTGGCAGGCAGGTGGCTACATTTATCTGAATCCAAAATATGCAACACCGGTTCCA
TGTTCCAAGTCACTGCGCCAGGTGACACAGTTGAGCAACGAGTGCCAGTTTGACAGACAGGTGACACACTGGGCGGGCACACACGAACTGATCGAGAATG
TTACAAACAAGACTGACTCCGGCGACCCATCCGCCGTCTTGCATTACATGGCATACCTTTGCGTCCAGGTCCTGGCGGTGCTCTCGTACTTGTGCCGGTC
CGTCTTGTACATGTGGGCGATCTCAGGGACCAGAGGGTCATCAGGGTTCGGGTCACACAGCAGGGAGCAGATGGACAGCAGCACCTTGGAAATGGTCAGA
GCGGGGCTCCATTGGTCCTTGAGGATGTCCAGACAAATGCTCCCGTTGCTGTTGATGTTTGGATGGAACACCTTGGTGCGGAATGCCACCTTTGGTGGTT
TGAAAGGATAATCAGGAGGGAAGTGGATAGTAACTAGGAAAACTCCACCAGAATATGGGCTGTCAGATGGGCCCATTATTGTTGCCTGCCAATGGAACAT
ATCTTCACCCACAGGACCTGCGCTGCATGAGGTAGGGGGGTCCTTCTGCAGATCCTTAAGCTCCTTCTGTATCCTCTTGGACGCCATCGCGCCCTTGCTC
GCCGCCCTCTGGCTCGATCTCCTCTCTGCCTCCTGCTTCCGTTTCTCCGCCCCCCTCCTCGCAAGAACCAATAATGGGACGGAACTGGGGAAAGGGGCCA
GGAGCAGCAGGGCTATATATGTAAATGGGCCTCCCGTTCCCCTCGTGC
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