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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_MS_all.Contig2618
Contig Information
Length 830 bp
Tissue Seed DPA5 of DT3DL CS wheat
Clones 8 Clones [Download: CSV  ,  FASTA ]
whms10e18    whms10n22    whms20p09    whms18a03    rwhms10e18    rwhms10n22    rwhms18a03    rwhms20p09   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os06g0115500 [Oryza sativa (japonica cultivar-group)] >gi|7248415|dbj|BAA92738.1| putative 60S ribosomal protein L13E [Oryza sativa Japonica Group] >gi|24413953|dbj|BAC22205.1| putative 60S ribosomal protein L13E [Oryza sativa Japonica Group] >gi|113594653|dbj|BAF18527.1| Os06g0115500 [Oryza sativa (japonica cultivar-group)] >gi|125553806|gb|EAY99411.1| hypothetical protein OsI_21382 [Oryza sativa Indica Group] >gi|125595832|gb|EAZ35612.1| hypothetical protein OsJ_019095 [Oryza sativa (japonica cultivar-group)] >gi|149391053|gb|ABR25544.1| 60S ribosomal protein l13-2 [Oryza sativa (indica cultivar-group)] >gi|215678596|dbj|BAG92251.1| unnamed protein product [Oryza sativa Japonica Group]
Score 858
Evalue 3.42206e-90
Total Hit Count 304
Registered year 2003
Contig Sequence     [ Download ]
>Wh_MS_all.Contig2618 
TTTTTTTTTTATGCCAACAAGGGGTAACACTGAACAGCATATCATGCAAACAAGTACCAGGGTATCAAAGCCATCCGCTGGTCTCTTTTTCCAGCCCCAA
AACAAAATTTAGAACAAGTTCCCGATGATAACATTCACTAGCTGCAGAATGAAACAAAATATCTTATCACTTCTTTTCTTCCTTCTCTGCCTCGGCGGCT
TTCTTCATGCGGGCACCGAGCTGGCACTGGTTCATCCTCTCGACACGGAGCTTGCCGTAGGCCTTGAACGCCTTCATCTCCTCGGTGACCTTCATGAGCT
CAACCGAGCGCTTCTCACCACGAGTAATAGGCATGTAGTCACCCTGGACCTGGGTGGCTGTGGCAAGTTCCTCAGGGGTAGAATCACCAGCCTTAACCTT
GCGAGCACGCCTTGGGAAGATAACCAGCTTGGCCTTGTAAGTCTTGAGTCTCTGAATGTTAGACTGCATACCCTCAAGTGACCGGTTTTTACGGCGGTGG
TCCACAGAAATGCCAATAGTAGGAGCTAGCTTCTTCGGAATGCCCGCTGACTTCAGCTCCTCAAGGGTAAAGCCTCTCCCAGCCCTTGCCTTCATGTTGT
ACTTCCGTGTCTGGCATTGCACGATGGGACGAAGAGGACCAGATGTTGGGCGAGGGAAGATCTTCACAGCCTTCTTTTGACGAGCAATGCGGCGCCTCTG
CTTGCGGGCAGGCTGGTTGAACCAGGTCTTGACATAGTTCTGCCAATGCTTCTTGAAGTGTCCGTTAGGGATAACATTGTTATGCTTCACCATTTCGACC
CCTTCTTACCTGCACTGCGGCGGAGGGGAG
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