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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig32771  (registered. 2012)
Contig Information
Length 867 bp
Clones alternative view 17 Clones [Download: TSV  ,  FASTA ]
Wh_h Spike at heading date 1
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 2
Wh_KMP Shoot grown under continuous light 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_CA 1
WH_XA Root 1
WH_XF Seedling, infected with leaf rust 1
WH_XV Leaves, plant was grown at constant 23℃ 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115464739|ref|NP_001055969.1|| Os05g0501300 [Oryza sativa (japonica cultivar-group)]
Score 390
Evalue 8.00E-107
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig32771 
CTGCCTCCCCTCCCCTCCATTCCATCTCCAACCCATTAAACAACCGGAGCCGTCCTCCTCCTCCTCCTCCCCCCACCAGATCTCAGATCCGCGGAGCTCC
GCCGCGCCTCCCATGGCGGTCAAGGTCTACGTCGTGTACTACTCCATGTATGGTCATGTTGCTAAGCTAGCTGATGAGATCAAGAAAGGTGCTTCATCTG
TCGAAGGCGTGGAGGTTAAAGTGTGGCAGGTCCCTGAGATCCTGAACGAGGAAGTCCTTGGCAAGATGGGCGCCCCGCCCAAGACCGACGTGCCGGTGAT
CTCCCCGCAGGAGCTGGCGGAGGCGGACGGCGTCCTGTTCGGGTTCCCGACGAGGTTCGGCATGATGGCGGCGCAGATGAAGGCATTCTTCGACTCGACG
GGCGGGCTGTGGAGGGAGCAGAGCCTGGCGGGCAAGCCGGCGGGCGTGTTCTTCAGCACGGGCACGCAGGGCGGCGGGCAGGAGACGACGCCGCTGACGG
CGGTGACCCAGCTGACCCACCACGGCATGGTGTTCGTGCCGGTGGGGTACACGTTCGGCGCCAAGATGTTCGACATGGACAAGGTGCAGGGCGGCAGCCC
GTACGGCGCTGGCACGTTCGCGGGGGACGGGTCGCGGTGGCCGTCGGAGATGGAGCTGGAGCACGCCTTCCACCAGGGCAAGTACTTCGCCGGCATCGCC
AAGAAGCTCAAGGGCTCCTCCGCCTGAGTGCATGATCATTGATCACCTGATCACTGGTGGTGTGTTGCTGCTGCTGCTGCTATCTGTATCTGTGGAGCTT
AAGTTTGATGTGTGATGTGGGCATTGTTATGTTAATTATTATGGCTTTGATTGAACCGGTTGTAAAG
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