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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig9320  (registered. 2012)
Contig Information
Length 1958 bp
Clones alternative view 326 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 4
Wh_dL Crown of seedling 10
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 10
Wh_h Spike at heading date 8
Wh_oh Pistil at heading date 8
Wh_r Root 10
Wh_yd Spikelet at late flowering 5
Wh_CSEC Callus 7
Wh_DPA20 Seed DPA20 14
Wh_EM Dormant seed with water absorption 16
Wh_EMI Dormant seed with water absorption after breaking 3
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 7
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_OKCS Seed DPA5 1
Wh_PCDAM Anther at meiosis 12
Wh_RDr Root of dessiccated seed 10
Wh_SHC Shoot grown with cold treatment 7
Wh_SHDr Shoot grown with dessication 5
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 6
Wh_VWD Shoot grown with dessication 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 11
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 21
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 9
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 3
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_XT Roots, 18 day old plants were grown hydroponically 6
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 7
WH_XA Root 9
WH_XB Root 14
WH_XC Root, treated at 50 microM Al for 6h 18
WH_XD Root, treated at 50 microM Al for 6h 6
WH_XE Seedling, infected with leaf rust 12
WH_XF Seedling, infected with leaf rust 7
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 7
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 13
WH_XV Leaves, plant was grown at constant 23Ž 1
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|57471702|gb|AAW50982.1|| ribosomal protein L10A [Triticum aestivum]
Score 425
Evalue 9.00E-117
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig9320 
AGATCGCATATAGATCTCTGATAACAGGCACAACGCAGAATCATAACAGAAAATGCAGTTCCATTGCTCCCATGATTTCTGTTCAAGATAAGACTAGTAC
GATTAAATACTTGTTGATATTCGCTTAGGCAAACACAAAATTGGTATCAGTGAAACAGATCTAATCCAAAGACAAGCAGGGGTCGGCAGGAAAGCCCGGT
ATCTTATCAACTTCACTGGAGCGCACACACTTAGAACACCCGTACACGCTTCCCCATGGTGCTCTTCACGTACAGGCACCTCACATTCTGCCAATTCTTC
TTCAGGAGGGACACAAGGAAGTTGACACTCATTTGGATGTTTTGTTGGATCTGCTTCTCGTCCATCGACAAGTTGCCCACAGCAACACCCATGCAAAGAA
CCTTCTTTAGCTGGAACTTGACTGTAGCTTTTGTCTCGTTGACCTTGGCTTCAAGAGATTCCTGGTGACTAACCAGAGTGGGAAACTTGCCTGCCTTGTT
AAGACCAGGGCCAAGGAGACGAGGGATCTGCTTGATTATGGCCTCTGATGCCAAGAAAGCATGGTACTTCTTGGCTAGCTTCTTAACAAGCTTCTTGTTC
TTGTTCATCTTCTTGAGACTTTCAACATCCATGTAGTCAAGTCCCATTTTCTCAGCCTGGTCGACATGCTGGGCATCACCAAGCATGCACACCCTCATCT
TTGGGCGGGGGATATGGGGCAGCTTCACTGAGCCGCTGAAACGTTTGTCCTTTTGTGGGTCGTAGTTTTTGAGACCGATCTGAAGCTCCACAGTCTCAGT
GAACTTGCGCTTCTTTTCTCTCGCCTCCCCAACAATCTGGGTGATGGCATCCTTAACAGCGTCACTTTGGAGCTTACTCATGGCTGCCGCCGATCAGTTG
ACGCCGGATTTTGGCGAGGCGGCGGCGGCGTGCCGAATTCGGCACGACCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAG
ATTTTTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACAT
CTGAGTAGCTAAAGGAAGGAAAATCAACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGAACAAGGGTTTTCATCAAAAGAAATCCGAAGCGGTTTCA
TTCGATTTGTTGTGGATTGGATGATGGAAAAACCAGCAAGCAGCAAGCGTAGTTAGAAAAGTTGCCGTAGCGCGCCCTACGGAGTTGTACAAAGTCAGCA
ACCGTTTTGGGGCGCAAGCATAGGCAACACAGGACTGATGACGGGGTGGGGCGCGCAGTGAACTGGTTTTCTAAAAAGATTGGAAGATCCGGCCAAAGAA
GGTGATAGCCCTGTTCATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATGATGATCGCTTTTACGCGAGAAAGGGGGACCACC
CTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCCAATCGGGGAGTGCAATAGAGAACCTGAGAT
CCGATGCGAACAATCAGTCGAAGGAGCGGAGCGCGGGCGCACTCACTCTAACGGCGTACCTTTCGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCT
TAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGC
TCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGNNNNNNNACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTT
TTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTC
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