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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig33150  (registered. 2012)
Contig Information
Length 921 bp
Clones alternative view 26 Clones [Download: TSV  ,  FASTA ]
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 6
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XV Leaves, plant was grown at constant 23Ž 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 4
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115452105|ref|NP_001049653.1|| Os03g0265900 [Oryza sativa (japonica cultivar-group)]
Score 261
Evalue 6.00E-68
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig33150 
TTTTTTTTTTAACACAAACTGAACATACTTCTGATTTATTTCCTGTACTTCATTCAGTTCCACAACACAGGCTCCCAAAACGACCCACGAGTTTGACAAG
TAGAGTAGATAGAACCTCACAAGAATCCCAATAACAAATACACGAATACGCGCCCTTAATTTTTTAATAGCCGATTTAACCGGAAGACACACGCATCTGA
TGTATGATGTTTGGCTGTAGTCTGTAGACCATTGCCCGGCTCAGCTGTCGCTTCTGTTGGGCTTGTCTGACTCCTCCTGATACACCGTGTCCGCTGACGA
GATCCACTCGTTTGTGGCGGGGTTCCCCTTGGAGGAAGCATGGCGCTCCGTCGCATCCGGGTCTTCCGAGAGCTCGAACGAGGCGCCGGCGGGCCTGTCC
ACCTTGATGAAGCCCGTCCCAGTCGTGTGATGCTGCTTGCCGACGCAGCCGAGGTCCTTGTAGTACTCCGTCTCCACGAACTCCTCGCCCGCCTTCCCGC
CCTCGCACACCAGTTTCTCGGAGTGGGCTTCGAGGTCCTGGAACTTGTCGAGCTCGGGGTGGGAGCCGTCGGCGCCGGGGCCGGCGAGCGCGTCGGTGTA
CACGGCGGAGTGGTCGCTGCGGGAAGGCTTGGAGTGGCGCTTGGGCGCCGCGCCGTCGTAGTACCCCCGCACCTCGTCCACCCTCACCGCCTCGTCCACC
GGGGACAGGTGCGCGTCGCTCCTGCTCGGCCTCGACATGTCGATCGATCCACCTCTCCGCACAAGCGCGCCGGCCGATGCTACTGCTGCCAGAGCGTACT
GGTGGTGTGTATTGTTATGCCGCGGCCGCGCTCGTTAGCGGTGGTGTTAATTGCGCGGGCGGTGCCGGTGGTGGAGGAGGAGGCTGAAAGCGCCGTGCTA
TTATGCCGCGCGCGACGGTGG
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