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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_SHDr_all.Contig2189
Contig Information
Length 2278 bp
Tissue Shoot grown with dessication
Clones 12 Clones [Download: CSV  ,  FASTA ]
whsd10g06    whsd1d06    whsd1n14    whsd5k17    whsd12p10    whsd14l21    whsd15k09    whsd17h18    rwhsd10g06    rwhsd1d06    rwhsd9d13    rwhsd18n10   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0821100 [Oryza sativa (japonica cultivar-group)] >gi|29124135|gb|AAO65876.1| heat shock protein cognate 70 [Oryza sativa (japonica cultivar-group)] >gi|108711797|gb|ABF99592.1| Heat shock cognate 70 kDa protein 2, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113550195|dbj|BAF13638.1| Os03g0821100 [Oryza sativa (japonica cultivar-group)] >gi|125588425|gb|EAZ29089.1| hypothetical protein OsJ_012572 [Oryza sativa (japonica cultivar-group)] >gi|215697587|dbj|BAG91581.1| unnamed protein product [Oryza sativa Japonica Group]
Score 3067
Evalue 0
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_SHDr_all.Contig2189 
CGCCGCCAGCAGCTGCGCAAAGGCTCCACAAACCCTAACCCTAGCTCCAAGCTTAGCTTCCATCTTCTCGATCTAGCTAGAGCCATGGCGCCGACCAAGG
GCGAGGGGCCGGCCATCGGCATCGACCTCGGCACCACCTACTCGTGCGTCGGCGTGTGGCAGCACGACCGGGTCGAGATCATCGCCAACGACCAGGGCAA
CCGCACCACGCCCTCGTACGTCGCCTTCACCGACTCGGAGCGCCTCATCGGCGATGCCGCCAAGAACCAGGTCGCCATGAACCCCATCAACACCGTCTTC
GATGCGAAGCGTCTTATCGGCAGAAGGTTTGCTGATGCTCCTGTCCAGAGTGATATTAAGATGTGGCCGTACAAGGTTATTCCTGGCCCAGCAGACAAGC
CTATGATTGTAGTGCAGTACAAGGGTGAGGACAAGCAGTTTTCAGCTGAAGAAATTTCTTCCATGGTCCTCATCAAGATGCGTGAGATCGCCGAGGCTTA
CCTAGGAGTAACTATTAAGAATGCTGTTGTCACCGTGCCTGCTTACTTCAATGATTCCCAGAGGCAGGCAACCAAGGATGCCGGTGTTATTGCTGGTCTT
AATGTGATGCGTATCATCAACGAGCCAACAGCAGCTGCAATTGCCTATGGTCTTGACAAGAAGGCTACCAGTGTCGGTGAGAAGAACGTGCTTATCTTTG
ACCTCGGTGGTGGCACTTTTGATGTCTCTCTCCTTACCATTGAGGAGGGTATTTTTGAGGTCAAGGCCACAGCTGGTGACACTCACCTTGGTGGGGAGGA
CTTTGACAACCGTATGGTGAACCACTTTGTCCAAGAGTTCAAGAGGAAGCACAAGAAGGATATCAGTGGAAACCCCAGGTCTTTGAGGAGGCTCAGGACT
TCATGTGAGAGGGCGAAGAGGACCCTTTCTTCCACTGCCCAAACCACCATCGAGATTGATTCACTCTTCGAGGGAGTTGATTTCTATTCCACCATCACCA
GGGCCAGGTTTGAGGAGCTCAACATGGACCTCTTCAGGAAGTGCATGGAGCCAGTGGAGAAGTGCCTGAGGGATGCCAAGATGGACAAGAGCACCATCCA
TGATGTCGTGCTTGTTGGTGGTTCCACCAGAATCCCCAGAGTTCAGCAGCTGTTGCAGGACTTCTTCAACGGGAAGGAGCTCTGCAAGAGCATCAACCCT
GATGAAGCCGTTGCCTACGGTGCTGCCGTCCAGGCTGCAATCCTCAGCGGTGAGGGGAACGAGAAGGTGCAGGACCTTCTCCTCCTGGATGTCACCCCAC
TGTCTCTTGGTCTTGAGACTGCTGGAGGAGTCATGACTGTGCTCATCACCAGGAACACCACCATCCCCACCAAGAAGGAGCAGGTCTTCTCCACCTACTC
CGACAACCAGCCTGGTGTGCTCATCCAGGTGTTTGAGGGTGAGAGGACAAGGACCAGGGACAACAACCTGCTCGGCAAGTTTGAGCTCTCTGGCATCCCG
CCTGCGCCCAGGGGTGTTCCCCAGATCACTGTCTGCTTCGACATTGATGCCAACGGTATCCTGAATGTCTCTGCTGAGGACAAGACCACTGGCCAGAAGA
ACAAGATCACCATCACCAACGACAAGGGCAGGCTGAGCAAGGACGACATTGAGAAGATGGTCCAGGACGCAGAGAAGTACAAGTCTGAGGACGAGGAGCA
CAAGAAGAAGGTTGACGCCAAGAACTCCCTGGAGAACTACGCCTACAACATGAGGAACACCATCCAGGACGAGAAGATCGCCTCCAAGCTGCCTGCTGAT
GACAAGAAGAAGATCGAGGACGCCGTTGACGCCGCGATCCAGTGGCTTGACGCCAACCAGCTCGGTGAGGTTGACGAGTTTGAGGACAAGATGAAGGAGC
TGGAGGGCCTCTGCAACCCCATCATCGCCAAGATGTACCAGGGCGCCGGTGCTGGCATGCCCGGAGGCATGGACGAGGACGCGCCGGCTGCGAGCGGCGG
TGCTGGCCCCAAGATCGAGGAGGTCGACTAAGTTAGTCGCTTTTATATAGTGAGAAATACACTATACACCATTTTATTCAGTCCTGGGTGCCAATCATAT
CACCTGGGCTGGAAGTTTTGTTGTACTTTTTGGTCTGTAGCATCACGAGACTTGTGTGTGTCGTGAACAATGCAATGATGCATGTTTTGGCTCATTGTTG
ATTTCAGCTTAATGCTTATTATTTGGACTACCCTACCCGTGTGATTTCATTCTGAATTCTTAGCTTAAATTTGGTTGT
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