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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig8800  (registered. 2012)
Contig Information
Length 1244 bp
Clones alternative view 60 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 2
Wh_r Root 2
Wh_yd Spikelet at late flowering 2
Wh_EM Dormant seed with water absorption 2
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 6
Wh_OKCS Seed DPA5 1
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 2
Wh_V483 Shoot grown under cold condition for 3days 3
Wh_VABA Shoot with ABA treatment 2
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 6
Wh_VWD Shoot grown with dessication 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_SP 1
WH_XB Root 6
WH_XC Root, treated at 50 microM Al for 6h 4
WH_XD Root, treated at 50 microM Al for 6h 7
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XV Leaves, plant was grown at constant 23℃ 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115451401|ref|NP_001049301.1|| Os03g0202200 [Oryza sativa (japonica cultivar-group)]
Score 463
Evalue 2.00E-128
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig8800 
TTTTTTTTTTAGCAGTAAATCTCAACTAGCGGTAAAATCAATCAACACCGCATGAAAAATCAAGTGTAGCTTCTTCTTCAAGTAACATACTACCGTGAAA
GCTACTCGGAACTCACAGTAGAAAGAAACAAGCTGCATACATCTATCAATGGGGAAGTACTTCGATCATCAAAAAGTAAACGCCTGGACAAAAATCCAGG
TGAAGGCCTATCGGATCCTGCCCACAGAGCACCTAAACCTCCAGAGATTTAACAGAACATGTCTGCGGAACAAATTATTGGCCATAGCTTCACAAAAAAT
AACCAAAGAATCCGATGTTCAATCGCTATCATCCACGTATGATCTCATCAGGGCTTGAGCGCGAGTGACAGCCCAAACTTGGGTGCTCTGTCCAAGGCCT
TGGTGTCGAACTCACCAGATATCGTCAAGAGTGACTTTGGTTTAACCTCGTGCTGGAGGAGAGCAGCAAGCTTTCCAGTGTTGTTGAGCCTTGCCTTCAC
AGCTGTCTGAGGGTCGACGGTGTACAGGCCACCAACTGTCAGTGTGTTCTCGTTCGTTGAGAGCTTCCGGGTAAATTCAGCCACGGCCGAAGCCTTCTGC
TTCTCATCAAGGTGATACACACCTGACACTTTGATGGTGTCACCTTTGTCGGCCAGAATAGCTGAAGCATGGAAGTCAGGCTTGGTTACACTGAAACCAC
CAGTGTACTTGGTAAACTTTCCTGAAGAAGTGTCAAACCCAGCCTCCCCACCGAAGGCAAGTCCTTTAGGGCCTACTACCAAAGAAAAATCGACCACAGG
AGAGGGCTTCATGCCAACAGCGGCAGCAAAAGTTGCATGGTCGTGGAAGTATTGCACCTCCACCTTTCCAGCATTGTAATCAGGAAATTTGATAGACGTC
ACAAGCTTTGTGGATGGCAGGACATCCAAGACAGTCAAGGTAGTAGAGATATTTGATTCTGTGTCCACTTTAACATCAACAAGATTATTCTTATACTTGT
AAGCTGATGCTACATCAAGAGAATAAAGCCCTCCCTTCTTCACAGCTGTGGAAGTGACGGCCACTCCGGAGGAGCTGACGGTGGAGACGGAGAGCTTCTG
GTCGTAGGTGTAGTCCCTGGTGAGCAGATCCTTGGCCTTCTTGCCGATGTCGGTGAAGAGGCCGGGTCCCTTCATGGCCATGGCGGCGGCGGCGTGGGGG
GAGGGGGTGCGGGGAGGCGGCCGCCGAGGAGGAGGGGCGAGGAA
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