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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig26132  (registered. 2012)
Contig Information
Length 948 bp
Clones alternative view 299 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 5
Wh_dL Crown of seedling 10
Wh_e Seed DPA10 7
Wh_f Spike at flowering date 6
Wh_h Spike at heading date 7
Wh_oh Pistil at heading date 7
Wh_r Root 8
Wh_yd Spikelet at late flowering 11
Wh_SH - 7
Wh_CSEC Callus 5
Wh_DPA20 Seed DPA20 4
Wh_EM Dormant seed with water absorption 10
Wh_EMI Dormant seed with water absorption after breaking 10
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 3
Wh_MS Seed DPA5 of DT3DL CS wheat 4
Wh_OKCS Seed DPA5 12
Wh_PCDAM Anther at meiosis 14
Wh_RDr Root of dessiccated seed 6
Wh_SHC Shoot grown with cold treatment 7
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 8
Wh_VABA Shoot with ABA treatment 2
Wh_VHS Shoot with heat shock treatment 6
Wh_VWD Shoot grown with dessication 3
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XN Leaves, plant was grown at constant 23Ž 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XT Roots, 18 day old plants were grown hydroponically 14
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_SP 5
WH_XA Root 14
WH_XB Root 6
WH_XC Root, treated at 50 microM Al for 6h 12
WH_XD Root, treated at 50 microM Al for 6h 11
WH_XE Seedling, infected with leaf rust 6
WH_XF Seedling, infected with leaf rust 17
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 14
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 10
WH_XV Leaves, plant was grown at constant 23Ž 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|729738|sp|P40621.1|HMGL_WHEAT|HMGL_WHEAT RecName: Full=HMG1/2-like protein
Score 318
Evalue 4.00E-85
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig26132 
TTTTTTTTTGGAGGACAACTGCTTAATCTAACATTACCCAGACTGATATTATCACAATGTTAGCCGGTGACAATGGACGGAAAGAGTAACCATCTAGGTA
CAAGCAGGGGCACCCCGCGGAAGAGGACATACACCCTCCACCACTAGGGCATCCCCGCCGGCGGCGGCGCCAACAGGGAGCGCTATCCGTTATAGCAGGA
CAATGACAGGAAAAAGGTAAAACAACATCACGATGTGAAGTGAAACTTGGGATAATTCTAGTGGAGATGGATAGGCTCCTTATGACACCACCGCACACAG
CTCAGGTCCGTTCTCGCACAGCAGCTCCCGACTTGTCCGCCGGAGCAGCCTTGACAAGATGCGTCTTCTTCACTCGTCATCGTCCTCGTCCTCATCGCTG
CCCTCATCGTCATCGTCGTCATTGATCTCCGACTTGGACTTGTCAGATTCCTCCTCATCTTCCTCCTCTACCTCCTTGGCCGCAGCCTTCTTTGGGGCAG
CAGCAGCAGCGCTCTCGCCCTTGTTGTAGGCAGCAATGGCCTTGTTGTACTCGCCCTTGAGCTTGTTGGCCTTGGCCACATAGGGGGCCTTTTCCGATTC
GCTCAAGCTCTTCCACCTCTCACCGGCCGCTTTGCCGACGGCGGCGACGGACTTGTTCTTGGGGTTCTTCTGCTTGAACTCCTCGCGGAACTCGCCCATG
AAGACGAAGAAGGCGGATGGCGCCCTCTTGGGCTTGTTGGGGTCCTTGCCGGCCTTGCCCTTCTTCCCCTTGGCGGCCGGCTTCTCCGCCCCCTTGCTCT
TCACCGCCAACTTGGCGTCGGCCTTGGCGGCGCCCTTGGATTTGGCCCCCTTCATGGCTGGTTTCCTGGGGGGAGGGGGCGGGGGAGAGAGGGCGCTCCT
GGTCTGGGTTGGGGAAAGGAGGAGGAGACGCAGACCTCGTGCCGAATT
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