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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig1852  (registered. 2012)
Contig Information
Length 1702 bp
Clones alternative view 232 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 8
Wh_e Seed DPA10 3
Wh_f Spike at flowering date 1
Wh_h Spike at heading date 8
Wh_oh Pistil at heading date 4
Wh_r Root 4
Wh_yd Spikelet at late flowering 12
Wh_CSEC Callus 15
Wh_DPA20 Seed DPA20 4
Wh_EM Dormant seed with water absorption 3
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 5
Wh_KMP Shoot grown under continuous light 10
Wh_KMV Shoot grown with continuous light after cold treatment 7
Wh_MS Seed DPA5 of DT3DL CS wheat 9
Wh_OKCS Seed DPA5 8
Wh_PCDAM Anther at meiosis 3
Wh_RDr Root of dessiccated seed 7
Wh_SHC Shoot grown with cold treatment 6
Wh_SHDr Shoot grown with dessication 6
Wh_V4816 Shoot grown under cold condition for 16days 5
Wh_V483 Shoot grown under cold condition for 3days 5
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 7
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 4
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23Ž 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 3
WH_XR Roots, 18 day old plants were grown hydroponically 8
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 9
WH_XA Root 11
WH_XB Root 11
WH_XC Root, treated at 50 microM Al for 6h 4
WH_XD Root, treated at 50 microM Al for 6h 10
WH_XF Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|90289596|gb|ABD92930.1|| alpha tubulin-2A [Triticum aestivum]
Score 920
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig1852 
CCCGGGCTGCAGGAATTCGGCACGAGCACGAGGCGTCTTCGTACTCGCCTCTCTCCGCGCAACCGAGCCTTCGCCCTCGTCCTCCCCATTTCGCCAGCGG
CGCAGCCCACCAACCACCCCCACCCGCCGCCATGAGGGAGTGCATCTCGATCCACATCGGCCAGGCCGGCATCCAGGTCGGGAACGCGTGCTGGGAGCTC
TACTGCCTCGAGCATGGCATTCAGCCTGATGGCCAGATGCCCGGTGACAAGACCGTTGGGGGAGGTGATGATGCTTTCAACACCTTCTTCAGCGAGACTG
GTGCTGGGAAGCACGTCCCCCGTGCTGTCTTCGTAGATCTCGAGCCCACTGTGATTGATGAGGTGAGGACTGGCGCTTACCGCCAGCTCTTCCACCCTGA
GCAGCTTATCAGTGGCAAGGAGGATGCAGCCAACAACTTCGCCCGTGGTCATTACACCATTGGCAAGGAGATTGTTGATCTCTGCCTTGATCGTATCAGG
AAGCTTTCAGACAACTGCACTGGTCTGCAGGGATTCCTTGTCTTCAACGCTGTTGGAGGTGGAACTGGCTCTGGCCTTGGTTCGCTTCTCCTGGAGCGTC
TCTCTGTTGACTATGGAAAGAAGTCCAAGCTTGGGTTCACAGTTTACCCATCTCCCCAGGTCTCCACTTCTGTTGTTGAGCCATACAACAGTGTCCTGTC
CACCCACTCACTCCTTGAGCACACCGATGTCTCTATCCTTCTTGACAATGAGGCCATCTATGACATCTGCCGCCGCTCCCTTGACATTGAGCGCCCAACA
TACACCAACCTCAACAGGCTTGTTTCTCAGGTCATTTCATCATTGACTGCTTCCCTGAGGTTTGATGGTGCTCTGAATGTTGATGTCAACGAGTTCCAGA
CCAACCTGGTGCCCTACCCGAGGATCCACTTCATGCTTTCCTCCTATGCCCCAGTGATCTCAGCCGAGAAGGCCTACCATGAGCAGCTGTCTGTTGCCGA
GATCACCAACAGCGCCTTTGAGCCTTCCTCCATGATGGCCAAGTGCGACCCCCGCCATGGCAAGTACATGGCCTGCTGCCTCATGTACCGTGGTGATGTT
GTGCCCAAGGATGTCAACGCTGCTGTGGCCACCATCAAGACCAAGCGCACTATCCAGTTTGTTGACTGGTGCCCCACTGGCTTCAAGTGTGGTATCAACT
ACCAGCCACCTGGTGTCGTCCCAGGCGGTGACCTTGCCAAGGTCCAGAGGGCTGTGTGCATGATCTCCAACTCCACCAGTGTTGTCGAGGTCTTTTCCCG
CATCGACCACAAGTTTGACCTGATGTACGCCAAGCGTGCCTTCGTCCACTGGTACGTGGGTGAGGGCATGGAGGAGGGAGAGTTCTCTGAGGCCCGTGAG
GATCTTGCTGCCCTGGAGAAGGACTACGAAGAAGTTGGTGCTGAGTTCGACGAGGGTGAGGACGGTGACGAGGGCGATGAGTACTAGAGCCTGCCTCCTG
GTGCTTTCCCAAGGCATGCTGCTGCAATCCTATGATCTGCCCGAGTGGCTTTATCTGTTATCTGTCTGTTTGAACATTTGCTTTGTGGTGTTTGTTTTAC
AACCTGTTGTGTTGTAAGAACCTTGTATGTTTGAACCTGTTATGCACCTTGGTTAATATGCATGCTATCTGGTTATCTAAAAAAAAACCTCTAAAAAAAA
AA
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