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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_OKCS_all.Contig1778
Contig Information
Length 1476 bp
Tissue Seed DPA5
Clones 4 Clones [Download: CSV  ,  FASTA ]
whok10b05    whok8p20    rwhok10b05    rwhok8p20   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os08g0477800 [Oryza sativa (japonica cultivar-group)] >gi|42407860|dbj|BAD09002.1| unknown protein [Oryza sativa Japonica Group] >gi|113624015|dbj|BAF23960.1| Os08g0477800 [Oryza sativa (japonica cultivar-group)] >gi|215694710|dbj|BAG89901.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218201317|gb|EEC83744.1| hypothetical protein OsI_29607 [Oryza sativa Indica Group]
Score 277
Evalue 2.40978e-37
Total Hit Count 31
Registered year 2003
Contig Sequence     [ Download ]
>Wh_OKCS_all.Contig1778 
GGCGGCATCCTGCAGCGAGGTCTGAATTGGTCATTATGGTGAGGAAAAGTGCAGAGAAAAGTTATGGTCGTATGGCTGCATGCACATCAAGTCCTGAACC
CTCAGAAAATAACCCAAGGCAGAATTTCTGTTTAGGAGATATAACATGGGTTAAGCATGATGGCTCCTCATGGTGGCCAGCCCAGGTCATTGATGAAGCA
TGTGCCAGTAGCAAGGCCAAGAAGAAGACCAGCCATGACGCTCTGGTTCGACTGGTATGGCACATGCCTAGACTTGTATGTTGACCCTTGGAAGTCTAAC
ATGGAATTCGAAATGTTTCTGAAGAAAGAAAATAAGACAGCCATGGAAGCATTCCATGAGGTGCTTCAGAAGGAGCTCTCTCATTTTAAGTCGGCCAGTG
ATGACGAGGAGGAAGCTGTCAACACAAAAGCCAAGACGTCTACTAAGAAAGTCAGAAAGCAAGAAGCCTTAGAGCAGGACCAAGAAGTTCGGAGCAATGC
AGAAGGTGGAGGTGCTGCTCAGAAAGGAAAAAAGCAGAAAGGTGTGAGGCAAGCAAGTGCTCTTGACAAAGCTTTGAGTATAGATTCTGCTGAAGGTTTA
AGAGATAAGACACCCCAAGCAAGCTTCTGCTGTGCGAGATAAAAAGAGTGGTAAGAAGGCATCATCAGGAACATCGGTGGCCAAAAAGGAAGGATCCTCA
AAGCGGTCGGGCCGTACCAATCTGAAGGAACATTCAGATGCGGCGGAGGACAGCACATCACAGCTCCATGTTTCAAGCGCAAGTGAAAATGCAGCTGAAG
CAGGAGACATGACATCCGTGAATCGAAGCCAGCACAAAACTGGTTTGACGGTCGAAGGAACCCACCGGAAGATAAAAGCTATGGTCAGGGATATACTGCT
GGGGGACGTCATAGACAGGCAGCTTGCTGCTGAAATGGCATATGTGGATGAAGTGATCTTTGGAATCTGTGAAGCTACCGAGGCAAAGGCGACTGCTGCT
ACTACTACTGAGACAGAGGGTGGACTAAGCACCAAGCGGGCCGCTAGTGGGCTGGAGGCTGACTCAAGCCGTGCTGCGAAGAAGAAACCTAGAAAGGGCA
AGGCGGCAAAGCCGGAGACCAAGGACCCCAACTCTTCTCCTGGGCGCGGGGGGATCGGAGCAGCGTAGCGTGCGCCAGATCAAGATCATGCAGAGCCTGG
GCCTGATCGCGCCGTTGGGATCTCCGTTCGACGTGAAGGGTTCTGCTGCAGTCGCCCGTTGATGATATTTTGTAAGCACACCATTGGTTCTGTATGGAAA
CCTGTAGTTATGTTGCCTACCTGATCTACCTACTAGTTTACTAGTGCCAATTTCTGTTCTTGTTTACGGAAGATTCGGCCCGGACATAGCTGCTGCGCAC
GTAAGCGCACAGTTAGTTCTATCTGTATCAGCGCAAAGACGAGCCGCAGTCGCTCAGTGCTGTACCGAATGATATA
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