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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig22873  (registered. 2012)
Contig Information
Length 822 bp
Clones alternative view 86 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 10
Wh_dL Crown of seedling 5
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 1
Wh_h Spike at heading date 1
Wh_oh Pistil at heading date 2
Wh_r Root 3
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 4
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 2
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 5
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23℃ 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_SP 1
WH_XA Root 7
WH_XB Root 6
WH_XC Root, treated at 50 microM Al for 6h 3
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|226531716|ref|NP_001149240.1|| 40S ribosomal protein S9 [Zea mays]
Score 377
Evalue 6.00E-103
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig22873 
GTCGAAAACATCACGACCAAATAGCTCCAAACATAAAGAAGTGCATACATGCTAACAACAGTGATAAAGTGACAAAATGACAAGAGGATAACCCATGAAA
GTCTCAGGCCTCTCAGCTAAAGTACTCATAACACCAACATTTGATAAATATAAGGTGATAGCTACTAGTTCCTCATTCCTCTTCCTCATCACCACCGGCG
TCGCCGCCACCACTTGCCTTCTTCTGGTTCTTTCTCTTCACCCTGCCTGCAGGGCCTCCGCCGAATGGACTTGTCAGTGAGAAGTCGATGTGCTTCTCAG
ATTCAACCCTCACCATGAACGACGGGACATTGACGATCTGCCTGCCAACCCTGATGTGGCGTTGCCTGATCAAGACACGGGCATGGTGGATGGATTTTGC
CATGCCAGCCTTGAAGACAAGAGTCTGAAGGCGCCTTGCAAGGAAGTTCTCAGCAGTCAGGGCAAGGACGTAATCAAGCTTATCCTGGCCCTCAGCAAGG
AGACCATAGCGGTTCATGCGACGGAGAAGAGCCGCACCCTCAAAGATACGGCGGGGATTCTTCTCATCCAGTGTGAGCAAGTGTCTTGCAGCATTACGGA
TCCTGCTCAATGCATACTGAACCCTCCAGAGCTCACGCTTGCACCTCAATCCATACTCACCAACCAGCTTCAGTTCTGCATCAAGACGCTCCTTCTCATA
AGGACGCCTTGGTTTCTTGAATGTCTTACCATAGTTGCGGTAGAAGTTGACGTGCACCATGGCTGGAGCTCTCTCCTCTCTCCCCCGCTGCCGCCGCCGC
CGCCGCCGCCGCTCTGTCCCGG
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