Contig Information
|
Length
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1520
bp
|
Tissue
|
Shoot with heat shock treatment
|
Clones
|
|
78 Clones
[Download:
CSV
,
FASTA
]
|
Assemble Result
|
Assemble Viewer
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Homology (BLAST)
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Top Hit
|
Os03g0592500 [Oryza sativa (japonica cultivar-group)] >gi|122246902|sp|Q10HD0|CB23_ORYSJ RecName: Full=Chlorophyll a-b binding protein, chloroplastic; AltName: Full=LHCII type I CAB; Short=LHCP; Flags: Precursor >gi|152013384|sp|A2XJ35|CB23_ORYSI RecName: Full=Chlorophyll a-b binding protein, chloroplastic; AltName: Full=LHCII type I CAB; Short=LHCP; Flags: Precursor >gi|50839002|gb|AAT81763.1| chlorophyll a/b binding protein [Oryza sativa (japonica cultivar-group)] >gi|108709618|gb|ABF97413.1| Chlorophyll a-b binding protein, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113549057|dbj|BAF12500.1| Os03g0592500 [Oryza sativa (japonica cultivar-group)] >gi|125544706|gb|EAY90845.1| hypothetical protein OsI_12453 [Oryza sativa Indica Group] >gi|125586998|gb|EAZ27662.1| hypothetical protein OsJ_011145 [Oryza sativa (japonica cultivar-group)]
|
Score
|
1226
|
Evalue
|
1.81579e-132
|
Total Hit Count
|
500
|
Registered year
|
2003
|
Contig Sequence
[ Download ]
|
>Wh_VHS_all.Contig1474
GCGCGCATCCTAGCAACCGGCGGCGGCAGGCGGAAGGCGAACAAGAAGGCGGCGACGATGGGGCACTCCAACGTCTGGAACTCCCACCCCAAGAACTACG
GGCCCGGCTCCCGCGTCTGCCGGGTCTGTGGAAACTCCCATGGACTGATCAGGAAGTATGGGCTGATGTGTTGCAGGCAGTGTTTCCGCAGCAACGCCAA
GGACATTGGCTTCATCAAGTACCGTTAATTCACCTGTTCCTGGTACCCTGAAGTGAAGCTGATCAGGGATGAAGGATTGGAGCACTTAATAGAATGCTTA
ATTTCAATTCCAGTAATGTTTGCTCGTGGTTTTATGTTTTGATGGATACTGAATGATGTAATTGTTGAACATGAGTTAATTACCCATGGAGAAGTCTTTT
GTTCATCTCACTGAGCTCGCAGGCAGCCCCAGCCACCAGCGAAATGGCCGCGTCGGCGCTGCACCAGACGACCAGCCTTCCTCGGCACCGCCCCGCGGCG
TGATGACCTCGTCCGCAGCGTCGGCGACTTCGGCGGCCGCATCACCATGCGCCGGACCGTCAAGAGCGCGCCCCAGAGCATCTGGTACGGCCCTGACCGT
CCCAAGTACCTGGGCCCGTTCTCCGAGCAGACCCCGTCGTACCTGACCGGCGAGTTCCCCGGCGACTACGGGTGGGACACCGCCGGATTGTCGGCTGACC
CAGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATCCACTCACGGTGGGCGATGCTCGGCGCCCTGGGGTGCGTGTTCCCGGAGATCCTGTCCAAGAA
CGGCATCAAGTTCGGCGAGGCCGTGTGGTTCAAGGCCGGTGCCCAGATCTTCTCCGAGGGCGGCCTCGACTACCTGGGCAACCCCAACCTGGTGCACGCG
CAGAGCATCCTCGCCATCTGGGCGGTTCAGGTGGTGCTCATGGGCTTCATCGAGGGTTACCGCGTTGGTGGCGGCCCCCTCGGCGAGGGCCTCGACATCA
TCTACCCAGGCGGCGCCTTCGACCCACTTGGCCTCGCCGACGACCCCGACACCGCAGCTGAGCTCAAGGTCAAGGAGCTCAAGAACGGCCGCCTCGCCAT
GTTCTCCATGTTCGGCTTCTTCGTGCAGGCCATCGTCACCGGAAAGGGGCCCGTAGAGAACCTCTTCGACCACGTCGCCGACCCGGTCAACAACAACGCG
TGGGCCTTCGCCACCAACTTCGCCCCCGGAAGCTAAATGTGTTAAGCCATCTGTCCGTCCATCGGACGAGATATGCATGTGTACTTGTACGTCGTGGATC
AACGTGTAGCTGCACGTACTTTGTGTGTTTATTTGTACCATGATCGAGCGAGCGAGATGACCTCTCGCTGGCTGCGCGGCAATGTAAATTAATTAAGCAC
GAGATGCACGAGCAAATGGATGGAAGAATCGTGTATCATTAGTACATTACTCGAGATCATCAACTGGCATGGCGTATATGGTACTTCAAGCTCATGAAAC
GGGACATTCGCAACGGCATA
|