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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig29516  (registered. 2012)
Contig Information
Length 885 bp
Clones alternative view 20 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 1
Wh_e Seed DPA10 2
Wh_yd Spikelet at late flowering 3
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|125543311|gb|EAY89450.1|| hypothetical protein OsI_10982 [Oryza sativa Indica Group]
Score 395
Evalue 3.00E-108
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig29516 
TAGTATATCGGAGTACTAATTAGCTACTAGAAATAAATACAATGCGCCCTAAACCTTGTCTATTGTGGAAACGCACGCAAATTTAACTGTGCCTTCTAAA
CTGTGACGGAGGGAGTAGTACTAAATAATCATGTTTCAATATCAACTTAAACATAAGATGGGGCAATGTATATATGCCTGAACGAAAAATTGCAGAACGA
TACTAGAATCCACCGTACAATGGAAGATACGGTATAGAATAGTAGGCGATCTAAATCTATCATTTAGTCGACCTCCTCAATCTTGGGCCCTGGGCCGCTG
CTGCCGCCTGCGGCACTGGCCGGAGCATCCTCATCCATACCACCAGGCATTTCAGCGCCGGCCCCCTGGTACATCTTGGCGATGATGGGGTTGCAAATGC
CCTCCAGCTCTTTCATCTTGTCATCAAACTCTTCAGCCTCAGCGAGCTGGTTGTTGTCGAGCCAGGTGATGGCACCGTCAATAGCATCCTCGATCTTCTT
CTTGTCGGCCTCGGGAAGCTTGGAGGCGATCTTGTCATCCTTGATGGTGTTACGCATGTTGTAAGCGTAGTTCTCCAGGGCGTTCTTGGAGTCCACCTTC
TTCTTGTGCTCCTCGTCCTCAGCCTTGTACTTCTCGGCCTCCTGCACCATCTTCTCGATGTCCTCCTTGCTCAGACGCCCCTTGTCGTTGGTAATTGTGA
TCTTGTTCTTCTGCCCAGTGGTCTTGTCCTCCGCCGAGACGTTCAGGATACCGTTGGCATCAATGTCAAAGCACACGGTGATCTGGGGGACACCCCTGGG
CGCCGGTGGGATCCCAGAGAGCTCGAACTTGCCGAGCAGGTTGTTGTCCTTGGTCCTCGCCCTCTCGCCCTCATACACCTGGATG
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