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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig17423  (registered. 2012)
Contig Information
Length 1168 bp
Clones alternative view 34 Clones [Download: TSV  ,  FASTA ]
Wh_h Spike at heading date 2
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_KMP Shoot grown under continuous light 1
Wh_OKCS Seed DPA5 2
Wh_VWD Shoot grown with dessication 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23℃ 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_CA 1
WH_XE Seedling, infected with leaf rust 5
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 6
WH_XV Leaves, plant was grown at constant 23℃ 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|1085952|pir||S49352|S49352 protein S1 - Phalaris coerulescens
Score 287
Evalue 2.00E-75
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig17423 
GGTGTGCGACGCGAGACGCGTCACGGGCTCGCTCACGCCGGCCGGCCGGGAGCGGACGGGCCGGTCGATCCATCCTGGTCGTCGGCGTCGTCGTCGTCGT
CGCCTCCAGAAGCACGAGCCCAGCATAGCACGGCCGCAGAATATTCCACGTCCCTTCCCTTTGCGCCCCAGCAGCAATAAAAAAGCAAGCCAATCCCCCA
CCCCTCCTCCTCTTCCTCCGATTAATCAAACCGCGCGGCGGCGGCGGCGGCGAGCGTGCGACCTACGACCACCAGACGACCCAACCGACCCACTGACCCA
CACCACCGGAGAGCTCTTCCTTTTACGTCAATCAATCGAACCCAGTTAAAGAACCTCTTAATTGCCCGCCAGGAGATCCGCCAGGCTTATCTTCTCCGTC
TCCTCCGACCTCACCTCGCCCCCTCGCCCCGCGGCTTCTGGGCTCCTTGGCGCCAAAATCCCCGCTTCCGATCCCAGGCGTTCAGGAAACAAGGGGCCTT
TCATTCAGCGATTCCTGCCAGTGTCAGTTCGCCATGGGGGGCTGTGTGGGCAAGGGTCGTAGCATTGTGGAGGAAAAGCTTGATTTCAAAGGTGGAAATG
TGCATGTCATAACAACCAAAGAGGACTGGGACCAGAAGATTGAAGAAGCAAACAAGGATGGGAAAATAGTTGTGGCAAACTTCAGCGCTTCGTGGTGTGG
GCCATGCCGTGTCATTGCACCTGTTTATGCTGAGATGTCCAAGACTTACCCTCAACTCATGTTCTTGACAATTGATGTTGATGACCTAATGGATTTCAGC
TCAACATGGGACATCCGTGCAACCCCGACGTTCTTCTTCCTCAAAAACGGCCAGCAGATCGACAAGCTCGTCGGCGCCAACAAACCTGAGCTCGAGAAGA
AAGTACAAGCTCTTGGTGATGGCAGTTGAACCATGCTACAGAATTAGAACAGAGCCAGCTTGTCATTGCTTATATATCTGTATTGCCATGCTTGTGTGTC
TTATGTGTTGCATGATAGTTTCCTGGTGTACAGTTTCCGTGTCTTTTCCGTCTAGACAATGTTTTACAATTTTGCGACACGCATATGCATATGCTGTGAA
ACTGTAAGATGACCCTGCTGGTAAAATGCTAGTTTTGTGAGAGTGTCATCTGCTGGGGAAAAAAAAAA
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