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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig11974  (registered. 2012)
Contig Information
Length 1348 bp
Clones alternative view 3117 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 8
Wh_e Seed DPA10 6
Wh_f Spike at flowering date 64
Wh_h Spike at heading date 50
Wh_oh Pistil at heading date 1
Wh_r Root 1
Wh_yd Spikelet at late flowering 5
Wh_SH - 107
Wh_DPA20 Seed DPA20 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 11
Wh_KMP Shoot grown under continuous light 89
Wh_KMV Shoot grown with continuous light after cold treatment 85
Wh_MS Seed DPA5 of DT3DL CS wheat 13
Wh_OKCS Seed DPA5 24
Wh_PCDAM Anther at meiosis 25
Wh_SHDr Shoot grown with dessication 54
Wh_V4816 Shoot grown under cold condition for 16days 159
Wh_V483 Shoot grown under cold condition for 3days 160
Wh_VABA Shoot with ABA treatment 113
Wh_VHS Shoot with heat shock treatment 223
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 108
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 58
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 74
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 60
WH_XN Leaves, plant was grown at constant 23Ž 130
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 42
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 137
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 171
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 22
WH_XE Seedling, infected with leaf rust 266
WH_XF Seedling, infected with leaf rust 245
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 305
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 197
WH_XV Leaves, plant was grown at constant 23Ž 26
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 19
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 27
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 21
WH_F/WH_R 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|4090293|emb|CAA10497.1|| hypothetical protein [Secale cereale]
Score 362
Evalue 8.00E-98
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig11974 
ATTCACAGGAGGTAGCTATGTAGATTACAGAGACGTGCATGCAAGCAGAGACCCGGCCCTGTGTTACACGTAGATGCTCTCTTAGCCGGCGAGAGCGCTG
GTGTTGTAGACGAGGAGGACGCCGCCGCCGAGGAGGCCGGCGAGGGTGACGGCCCAGATAAGAAGCCCGGTCGTTCCGCCGGCGTAGCGGTCACCAGATT
CAGACCATTCCTCTGGCGTGTAGATTGGGCTGTAGCCGTCGACGTTGGCGCCGTACTTGTCAACGAACTGGTACACGCCCTTCTTGCCCACCTTCCTGCC
GTTGGCGTCGATGTCGACTGTCAAGCCGCCTCCAAGTCCAAGGGGCTTGTCGACCTTGATCTTCTTGCCACCGCTGCAGACGACGGCGAAGGAGGAACCC
CGGCGGGAGAGGGAGGGGACGCTCGTCGGCGCCACAATCGGCGAGGTGATCATGGAGGCTGCCATCTCGCGCGCGCTCTCTCAAGCTCTGTCTGTCTGCC
TCCTAGCAAGCTATATACCTACATAGTACAGCCATGGCCCCCACCGTGATGGCCTCGTCGGCCACCTCCGTCGCTCCTTTCCAGGGGCTCAAGTCCACCG
CCGGCCTCCCCGTCAGCCGCCGCTCCAACGGCGCTAGCCTCGGCAGCGTCAGCAACGGTGGAAGGATCAGGTGCATGCAGGTGTGGCCCATCGAGGGCAT
CAAGAAGTTCGAGACCCTGTCTTACCTGCCACCGCTCAGCACGGAGGCCCTCCTCAAGCAGGTCGACTACCTGATCCGCTCCAAGTGGGTGCCTTGCCTC
GAGTTCAGCAAGGTTGGGTTCATCTTCCGTGAGCACAACGCATCTCCTGGGTACTACGATGGCCGGTATTGGACAATGTGGAAGCTGCCTATGTTCGGGT
GCACTGACGCCACACAGGTGATCAACGAGGTGGAGGAGGTCAAGAAGGAGTACCCTGACGCGTATGTCCGCATCATCGGATTCGACAACATGCGTCAGGT
GCAGTGCGTCAGCTTCATCGCCTTCAAGCCACCGGGCTGCGAGGAGTCCGGCAAGGCCTAAACAGCTCACTCACGACAGGCCATATATAAAGTGCCATTG
CAGTTTTGTCAACTCTGACATTGCTTTGGGTTTTCCTTCTCCATTTATCTTTCTTATTTGTTCCTAAGAATATGTGTATGTCCATGTTCATGTACCAACA
TGGCTCGAGAAAGCATGCTCGTATGTGAATGCTATCGGTGGCTATGTATATGCACGGACGCATAATATTATACAATATGTCAACTATATACGTTTTAATG
GTAAAAAAAAAAAAATATCAAAAAAACCGTGCTTATTACTTCCTTCAT
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