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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_SHC_all.Contig1960
Contig Information
Length 875 bp
Tissue Shoot grown with cold treatment
Clones 4 Clones [Download: CSV  ,  FASTA ]
whsc2i16    whsc12i11    whsc20f01    whsc8l07   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha >gi|170776|gb|AAA34306.1| translation elongation factor 1 alpha-subunit >gi|949878|emb|CAA90651.1| elongation factor 1-alpha [Hordeum vulgare subsp. vulgare]
Score 1252
Evalue 7.68918e-136
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_SHC_all.Contig1960 
CCTCCGTTCGTTCTTCTTCTTCGGGTTGGGTAGTTTACGTCTACCCACCAGCCATGGGTAAGGAGAAGACTCACATCAACATCGTGGTCATTGGCCACGT
CGACTCTGGTAAGTCGACGACCACTGGCCACCTGATCTACAAGCTTGGAGGCATTGACAAGCGTGTCATCGAGAGGTTCGAGAAGGAAGCCGCTGAAATG
AACAAGAGGTCTTTCAAGTACGCCTGGGTGCTTGACAAGCTCAAGGCCGAGCGTGAGAGAGGTATCACCATCGATATTGCTCTCTGGAAGTTCGAGACCA
CCAAGTACTACTGCACCGTCATTGATGCCCCTGGTCACCGTGACTTCATCAAGAACATGATCACCGGTACCTCCCAGGCTGACTGTGCTGTTCTCATCAT
TGACTCCACCACTGGTGGATTTGAGGCTGGTATCTCCAAGGATGGCCAGACACGTGAGCATGCTCTCCTTGCTTTCACTCTTGGAGTGAAGCAGATGATC
TGCTGCTGCAACAAGATGGACGCCACCACTCCCAAGTACTCAAAGGCACGTTACGAAGAAATTGTTAAGGAGGTCTCTTCCTACCTGAAGAAGGTCGGCT
ACAACCCTGAAAAGGTTCCCTTTGTCCCCATCTCTGGGTTCGAGGGTGACAACATGATTGAGAGGTCCACCAACCTTGACTGGTACAAGGGCCCAACCCT
GCTTGAGGCGCTTGACCAGATCAACGAGCCCAAGAGGCCCTCANACAAGCCCCTCCGTCTTCCCCTCCAGGACGTTTACAAGATTGGTGGCATTGGAACT
GTGCCTGTTGGCCGTGTTGANACTGGTGTCATCAAGCCTGGTATGGTTGTCACCTTTGGTCCCACTGGTCTGACA
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