Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6963  (registered. 2012)
Contig Information
Length 2221 bp
Clones alternative view 57 Clones [Download: TSV  ,  FASTA ]
Wh_r Root 1
Wh_EM Dormant seed with water absorption 2
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 2
Wh_V4816 Shoot grown under cold condition for 16days 5
Wh_V483 Shoot grown under cold condition for 3days 5
Wh_VABA Shoot with ABA treatment 4
Wh_VHS Shoot with heat shock treatment 6
Wh_VWD Shoot grown with dessication 7
WH_XI Two-week old seedlings（22℃ 16L-8D） 2
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XT Roots, 18 day old plants were grown hydroponically 3
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_CA 1
WH_XA Root 2
WH_XC Root, treated at 50 microM Al for 6h 4
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|68655495|emb|CAJ01713.1|| methionine synthase 1 enzyme [Hordeum vulgare subsp. vulgare]
Score 1157
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6963 
CTACTTAAGTCTGGCCCAAGGCCACACTTGCGCACACACACGCTTACATGGCCGCGGCCCAACACTACAATTGCACTGAGTGCCTCGCTGTACGCTTCAG
GGTTCAGTTAACTGCTGGACTGAACCTGAAGGCGTTACACCAACACAGCCAAGACAAGAACATCCGGAGAAATTTTGTAATTTGAAAACGTAACGTAACA
AACTCAAGACTTAGATGATGAACAATTCGCCACTCAGTTTACAATACACACCGACAACCGCCTCAAAAACCACCAAATCAAAGGGATGAGCACATGACGC
CGCGCCGCGCCGCGCCGAGAAACAAACTAGCCTAACCAACAGGTGGATACAGAGACCCAGATTATTCAAAGTAAACACGGCTATGGTGGCGACATCCTCC
TTGCAATTAAAATGGGGGAGCTGCTATACGGCTTACTGCGCCTTGGCGAGCTCGGCGCGGATCTGCTTGGCGGCCTCGACCATGTTGGTGAGGGCGGGCT
TGACCTCGGCGTACTTGCGGGTCTTGAGACCGCAGTCGGGGTTCACCCACAGGATGTTGGTGTCGAGCACCGCGAGCATCTTGTTGACACGGTCGGCGAT
CTCCTCCTTGGACGGGATCCTGGGGGAGTGGATGTCGTACACGCCCGGGCCAATGCCGGCGCCGTACACCACGCCCTCGCGGAAGACGGAGAGAAGCTTC
TCGTCGGACCGCGAGTTCTCGATGGTGATCACATCGGCGTCCATGTTGATGATGGACTGGATGATGTCGTTGAAGTTGGAGTAGCACATGTGGGTGTGGA
TCTGGGTGGTGTCCTGGACACCGCAGTTGGTGATCCTGAAGGAGTGCACGGCCCAGTCCAAGTAGAAAGCGTGCTCCGACTTGCGGAGTGGCAGACCCTC
TCTCAAAGCAGCCTCATCGATTTGGATAACCTGAATACCACCAGCCTCAAGGTCCTCGACCTCCTTCTTGATTGCAAGAGCAATCTGGTAGCAAGTCTCA
AACCTCGGTTGGTCATTTCTGACAAAAGACCAGTTAAGGATTGTGACAGGGCCTGTCAGCATACCCTTCATTGGGCGAGCAGTCATGCTCTGCGCCATCT
TGGACCAGAAGACGGTCATGGGGTTGGGGCGGCTCACATCACCATAGATGATCGGTGGCTTGACGCACCTTGATCCGTAAGATTGCACCCAACCATTGGC
AGTGAACGTGAAACCAGAGAGCTGCTCACCGAAGTACTCAACCATATCGTTCCTCTCAGGCTCTCCGTGCACAAGCACATCAATGTCAAGCTCTTCTTGG
ATCTTAACAACCTTGCTAATCTCCTCCTTGATGGCATTGGTGTACTCCTCCTCAGAGATCTTCTTTGCCTTGTACTCACGGCGGACTCTCCTGAGCTCCA
CTGTCTGTGGGAATGAACCAATGGTGGTCGTGGGAAGGATCGGAAGGTTGAGCTTCTTTTGCTGCGCATCCAACCTAGCGCTAACGGTGGTAGCGCGGCG
GTGATCAGAGCCCTTGAGGGCGGTGGCAGCCTTCTGGACCTCCTCATTTGTGACACGTGGTGACGACCTTCTTGAGGCCAGAGCAGCAGCATTTGCAGAG
AAGTAAGCCTCATCCTTTTGACCAGCCAATGCCTTGGCAAGGGCGTTCACCTCAACGACCTTTTGGGCAGCAAATGCGAGCCATGACTTAATCTCATCAT
CAAGCTTGGTCTCATTTACAAGGTCCACAGCAGTGTGCATGAGTGAGCAGGAAGTCGATACGACAAGCTTGTCCTTCCCAACAACAGCCTCAAGAGACTG
AAGAGTGGCGAGAGATGCAGCAAGGTCATCAGCCCAAATGTTGCGTCCATCTACAACACCAGCAAAGAGGTACTTTCCAGCGGGGAAACCACTCTTGACA
AGCTCAAGAGTCTTGGTTCCACGTTCAAGGTCAAAACCATAAGCAGTCACACTGCTCAATGATGTAAGAGTCTTGTATGAGTCTGCAGGGACGTCAGCGA
AGTAGGTCTCAACAAGAACGTTCAATCCAGAAAGTGCCGACTCAAGTTCTGAGTAAGCTGCAGAGAATGCAGACAGTTGGTGGGATTCAAGATCCTTAAC
AAGGGTGGGCTCATCAAACTGAATCCATGAAGCGCCAGCTGCCTTCAGCTCAGCAATAACCTCCTTGTAGACGGGAAGGATGCTGCTAAGAAGGGAAAGG
GGAGAGAATGATTTCTCTACA
page-top