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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig9097  (registered. 2012)
Contig Information
Length 883 bp
Clones alternative view 414 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 16
Wh_dL Crown of seedling 12
Wh_e Seed DPA10 5
Wh_f Spike at flowering date 15
Wh_h Spike at heading date 13
Wh_oh Pistil at heading date 1
Wh_r Root 16
Wh_yd Spikelet at late flowering 17
Wh_CSEC Callus 6
Wh_DPA20 Seed DPA20 11
Wh_EM Dormant seed with water absorption 3
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 8
Wh_KMP Shoot grown under continuous light 7
Wh_KMV Shoot grown with continuous light after cold treatment 12
Wh_MS Seed DPA5 of DT3DL CS wheat 14
Wh_OKCS Seed DPA5 12
Wh_PCDAM Anther at meiosis 6
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 9
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 8
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 16
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 5
Wh_VWD Shoot grown with dessication 11
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 14
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 17
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 7
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 11
WH_XN Leaves, plant was grown at constant 23Ž 7
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 8
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 5
WH_XR Roots, 18 day old plants were grown hydroponically 19
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 12
WH_XT Roots, 18 day old plants were grown hydroponically 6
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 13
WH_SP 13
WH_XA Root 8
WH_XB Root 9
WH_XC Root, treated at 50 microM Al for 6h 6
WH_XD Root, treated at 50 microM Al for 6h 7
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|13925731|gb|AAK49426.1|AF262982_1|AF262982_1 cyclophilin A-1 [Triticum aestivum]
Score 360
Evalue 1.00E-97
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig9097 
TTTTTTTTTTTTTGGATAATTCATAGCGGAGTTCATCTCATTCAAACGGTAAGATAGCAGCAGACACAGGAAGATAACCAAGGCGGCCGGACAGAGATCC
AGCAGCCCAAAGAGTCCACCTAAAACCCTCCTAAACCAACCACGGAGATCTCATCGGACGGACCAGGGGAAGACACGACACGACACACGACTCTCTTATT
TAGATCGACGACACGACACGGGACACACGGGGCGGCGACGACGACGGCGAAAGGCGACCCGCGCGCGGGCGGATCTAGAGCTGGCCGCAGTCGGCGATGA
CCACCTGCTTGGAGCAGGTGCCGCTGCGGGAGCCCACCTTCTCGATGTTCTTGACGACGTCCATGCCCTCGACGACCTCGCCGAAGACCACGTGCTTGCC
GTCGAGCCAATTGCAGGGGACGGTGCAGATGAAGAACTGGGAGCCGTTGGTGTTGGGCCCCGCGTTGGCCATGGAGAGGATCCCGGGCTTGGTGTGCTTG
TGGACGAACTTCTCGTCGGCGAACTTCTCGCCGTAGATGGACTCGCCGCCGGTGCCGTTGCCCCGGGTGAAGTCGCCGCCCTGGCACATGAAGTCGGGGA
TCACGCGGTGGAAGGCGCTGCCCTTGTAGTGCAGCGGCTTGCCGCTCTTGCCGACGCCCTTCTCGCCGGTGCACAGCGCGCGGAAGTTCTCCACCGTCCG
CGGCACCGCGTCCTTGTACAGCTCCATCACGATGCGCCCGGCCGGCGCGCCGCCGACGGTCATGTCGAAGAACACCCTCGGGTTGGCCATCTCGCTCGCC
GGGATCGGGGATGAGGGCTAGGGTTTTGAGATGGGGATTTCTGTGGGGATTGGGATTACCCCTCGTGCCGAATTCCTGCAGCC
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