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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig16878  (registered. 2012)
Contig Information
Length 968 bp
Clones alternative view 430 Clones [Download: TSV  ,  FASTA ]
Wh_h Spike at heading date 7
Wh_SH - 27
Wh_DPA20 Seed DPA20 2
Wh_KMP Shoot grown under continuous light 17
Wh_KMV Shoot grown with continuous light after cold treatment 35
Wh_OKCS Seed DPA5 1
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_V483 Shoot grown under cold condition for 3days 4
Wh_VABA Shoot with ABA treatment 10
Wh_VHS Shoot with heat shock treatment 36
Wh_VWD Shoot grown with dessication 13
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 22
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 13
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 21
WH_XN Leaves, plant was grown at constant 23Ž 17
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 9
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 56
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 60
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_SP 3
WH_XE Seedling, infected with leaf rust 6
WH_XF Seedling, infected with leaf rust 21
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 15
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XV Leaves, plant was grown at constant 23Ž 3
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 6
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 12
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|11990901|dbj|BAB19814.1|| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit"
Score 359
Evalue 3.00E-97
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig16878 
TTTTTTTTTTGCAGTGCCAAATAAAGAAACTTTTCCATGAATTAATAACATCAAGACAATGGTCCGCATGTTTTATATAATAAATATCACACAGGTTTTG
TATATGTGTAGCCGGCTCTAGAATTTACATATGCATGCTCGAGAATCTATGTTCGTACATACATACACAGACCATATAGAATGAAAAATATGCTCTGGTC
GTCCAGCAGAGTCGTGGACAAAAGTGAAGTTCACAAAAGACCTTCATACATAGGCCATTGTTTCAACTCGTAGTTTAGGCCTTGCCAGACTCCTCGCAAC
CCGGTGGCCTGAAGGCAATGAAGCTGACGCACTGCACCTGGCGTAGGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGGGTACTCCTTCTTGACCTC
CTCCACCTCGTTGAGCACCTGTGTAGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGACCATCGTAGTACCCGGGGGAGCTGTTG
TGCTCACGGAAAACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAAGTAGTCGACCTGCTTCAGGAGGGCCTCCGTGGAGA
GGGGTGGCAAGTAAGACAGAGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGCATGCACCTGATCCTTCCGCCGTTGCTGACGCTGCTGAGGCC
GGCGCTGCTGGAGCGGCGGCTGACGGGCAGGCCGGCGGTCGACTTGAGACCCTGGAAGGGTGCGACGGAGGTGGCCGAGGAAGCCATCACAGTGGGGGCC
ATGGTGTTGGAGGAGACGATCAATCTGCTGCCCGCGCACGAATTTCCGACCGATAAAGCGGCAATTGAACTGTTCCGCAGCCAGTGGCGCGATACCTTCG
AAGTGAAGCGCGATCCGGAACATATTTACCAGCAAGTGAGTAAAGGCACATTACCTGCCGGGATCGAG
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