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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig7002  (registered. 2012)
Contig Information
Length 809 bp
Clones alternative view 29 Clones [Download: TSV  ,  FASTA ]
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_SHC Shoot grown with cold treatment 1
Wh_SHDr Shoot grown with dessication 6
Wh_VABA Shoot with ABA treatment 2
Wh_VHS Shoot with heat shock treatment 2
WH_XI Two-week old seedlings(22℃ 16L-8D) 3
WH_SP 1
WH_XB Root 1
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 3
WH_XF Seedling, infected with leaf rust 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XV Leaves, plant was grown at constant 23℃ 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115453089|ref|NP_001050145.1|| Os03g0358100 [Oryza sativa (japonica cultivar-group)]
Score 324
Evalue 6.00E-87
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig7002
CATCAATAGCTCGTGTACCTCGACAAAAGCACCCAAAACAGATAAATAATTGATAGCTACACAACCTCTACTTACATAAGAGGAAGTCACAAATACAAGA
ACAATGATCAAACCAGGGGAAATATCACATTAATTTACTGGCAGAGATTGGTCTAGATATTACAACGGGGATACTTTGCAAGTGCCTACTTCTGCGAGTC
AGAAGATTCCTCCTCCTTTTTTGTCTGCGACTCGGAGGGTTCCTCCTCAAGTGCCTTCTGGATGTCTTTCTCGAATGAAAATGGAGTGGTAGCAGTTGCG
TATCTGTTGATTACTTTCCCATTCTTGTCAACAAGAAACTTGGTAAAGTTCCACTTGATTCTTGAACCAAACAAACCAGGTTTGCTAGCTTTCAAAAACT
TATAAAGCGGCGCAGCATCTGGGCCATTTACACGCACCTTCTGAAAAACTGGATATTCAGCTTTGAATCTTGTGCATGCAAAGTCTTGGATCTGCTGGTC
ACTGCCTGGCTCTTGTCGCAAAAACTGGTTGCAGGGGAATGCTAATATCTCAAAGTCTTTCTCCCTGTACTTCTGATAAAGCTCCGTCAGTTGCGTGTAA
TTAGTCTCCGTGAACCCGCATTTGGAGGCGACGTTGACGATGAGGAGGACCTTCCCCTTGTACGTGTCCAGGCACACCTCCTTGCCGTTGCAATCCTTAA
CGGTGAATTCGTGCACGGAGGTCTCCGGCACAGATTCGGACGCCCCCATCTCGCCCTCTCTTCGCCTCCCGGACGGCGTAAGTCCTCCCGAATCCTCTGT
CGAATTTTA
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