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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig21192  (registered. 2012)
Contig Information
Length 903 bp
Clones alternative view 178 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 4
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 2
Wh_r Root 1
Wh_yd Spikelet at late flowering 2
Wh_SH - 3
Wh_DPA20 Seed DPA20 2
Wh_KMP Shoot grown under continuous light 13
Wh_KMV Shoot grown with continuous light after cold treatment 16
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_RDr Root of dessiccated seed 7
Wh_SHC Shoot grown with cold treatment 6
Wh_SHDr Shoot grown with dessication 17
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_VABA Shoot with ABA treatment 4
Wh_VHS Shoot with heat shock treatment 6
Wh_VWD Shoot grown with dessication 12
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 3
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 4
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 4
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 7
WH_XR Roots, 18 day old plants were grown hydroponically 8
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 7
WH_XT Roots, 18 day old plants were grown hydroponically 8
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 10
WH_SP 4
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XE Seedling, infected with leaf rust 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 6
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|15667623|dbj|BAB68268.1|| drought inducible 22 kD protein [Saccharum officinarum]
Score 214
Evalue 1.00E-53
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig21192 
TTTTTTTTTTAAGCAATCCAGTACAAACAATGACACTATTAGTTCAATTTTTTTTTTGGATGGGCCACAAAAGTTTCGTGAGGACTTGCATAATAAAGTG
AAATTACAAATACAGGGCGCCGGTAGAATTGAAACACACACCGACACACGACACACACCGACGCATGAGGTGTGGGAGCCACTGCATGAACAGCAACCCC
ACTTATTCAGGCACGCGGAAGCTTAGCACGCAGAGAAAATCACGCACGGGCGAGCACGAGACCGGGCCCGCGTCCCAGCCTCTCTCACTTTATGGAACAC
ACGTAACGTAAGCACACGCACGGCCGGCGGCGAGGCCGGCCACCGCACGTCAACGACGATCTAGCCGAAGTGGTGGTGCTTCTTCTCGCCGCTGGCCTCC
TTGGCCTCCTTGTGGTCCTGCTTCTTCTCGTGGTGCTCGTGGAAGACGAAGCCGCCGGCGCCGACGGCTGCGGCGGCGGCCACCTCCTCCTCGATCTTGT
GCTTGTGCGCGTGCTCCGGGTCCTTCTTCGCCTCGTGCTTCTCGTAGAGGGCGAAGGCTCCGGCGGCGGCGGCGCCCATCTCGCCGAGGTGCTCCTTGTG
CTTGTGGTGCTTCTCCTCCTTGGTGATCCGCTCGTACTCGCCCTCGTTGCCGGTGGCGGTCACCACCGTCTCGGTCGAGTACCCGTACATGTCGACGCCG
CCGTCAGCGGCGGGCTGGAAGTCCTCGCCCTCCTTCTTGTGGTGGAACAGGTGGTGGTGGTGCTTCTCCTCCGCCATGGCTGGCTGATCGATTAGCTAGC
TAGCACTTGTGTGTGTGTATGTGACAGTAGGACAGCTGCTTATCTGCTTGGTTGTGTAGGTTTCCTACTGCCCGGGTTTTATAGGCTGAGGCCACTGTTA
GAA
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