Contig Information
|
Length
|
2327
bp
|
Clones
|
|
123 Clones
[Download:
TSV
,
FASTA
]
Wh
|
Spike at meiosis
|
18
|
Wh_SL
|
Seed DPA30
|
19
|
Wh_dL
|
Crown of seedling
|
12
|
Wh_e
|
Seed DPA10
|
5
|
Wh_f
|
Spike at flowering date
|
8
|
Wh_h
|
Spike at heading date
|
11
|
Wh_oh
|
Pistil at heading date
|
8
|
Wh_r
|
Root
|
14
|
Wh_yd
|
Spikelet at late flowering
|
14
|
Wh_yf
|
Spikelet at early flowering
|
14
|
|
Assemble Result
|
Assemble Viewer
|
Homology (BLAST)
|
Top Hit
|
Os03g0821100 [Oryza sativa (japonica cultivar-group)] >gi|29124135|gb|AAO65876.1| heat shock protein cognate 70 [Oryza sativa (japonica cultivar-group)] >gi|108711797|gb|ABF99592.1| Heat shock cognate 70 kDa protein 2, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113550195|dbj|BAF13638.1| Os03g0821100 [Oryza sativa (japonica cultivar-group)] >gi|125588425|gb|EAZ29089.1| hypothetical protein OsJ_012572 [Oryza sativa (japonica cultivar-group)] >gi|215697587|dbj|BAG91581.1| unnamed protein product [Oryza sativa Japonica Group]
|
Score
|
2244
|
Evalue
|
0
|
Total Hit Count
|
500
|
Registered year
|
2007
|
Contig Sequence
[ Download ]
|
>Contig16258
ttcggcacgaggcAGCAGCCGCCGCCAGCAGCTGCGCAAAGGCTCGACAAACCCTAACCCTAGTCCATAGCTAGCTTAGCTTCCTTCCTCTCGATCTAGC
TAGAGCCATGGC*GCCGACCAAGGGCGAGGGGCCGGCCATCGGCATCGACCTCGGCACCACCTACTCGTGCGTCGGCGTGTGGCAggcACGACCGCGTCG
AGATCATCGCCAACGACCAGGGCAACCGCACCACGCCCTCGTACGTCGCCTTCACCGACTCGGAGCGCCTCATCGGCGATGCCGCCAAGAACCAGGTCGC
CATGAACCCCATCAACACCGTCTTCGATGCGAAGCGTCTTATTGGCAG*AAGGTTTGCTGATGCCCCTGTCCAGAGTGATATTAAGATGTGGCCGTACAA
GGTTATTCCTGGCCCCGCAGACAAGCCTATGATTGTAGTGCAGTACAAGGGTGAGGACAAGCAGTTCTCAGCTGAAG*AAATTTCTTCCATGGTCCTCAT
CAAGA*TGCGTGAG*ATCGCTGAGGCTTACCTAGG*AGTAACTATTAAGAATGCTGTTGTCACCGTGCCTGCTTACTTCAATGATTCCCAGAGGCAGGCA
ACCAAGG*ATGCCCGGTGTTATTGCTGGTCTTAATGTGATGCGTATCATCAACGAGCCAACAGCAGCTGCAATTGCTTATGGTCTTGACAAGAAGGCTAC
CAGTGTCGGTGAG*AAGAATGTGCTTATCTTTGACCTTGGTGGTGGCACTTTTGATGTCTCTCTCCTTACCATTGAGGAGGGTATTTTTGAGGTGAAGGC
CACGGCTGGTGACACTCACCTTGGTGGGGAGGACTTTGACAACCGTATGGTGAACCACTTTGTCCAAGAGTTCAAGAGGAAGCACAAGAAGGATATCAGT
GGAAACCCCAGGTCTTTGAGAAGGCTCAGGACTTCTTGTGAGAGGGCGAAGAGGACCCTTTCTTCCACTGCCCAAACCACCATTGAGATCGATTCACTCT
TCGAGGGAGTTGATTTCTATTCCACCATCACCAGGGCCAGGTTTGAGGAGCTCAACATGGACCTCTTCAGGAAGTGCATGGAGCCAGTGGAGAAGTGCCT
GAGGGATGCCAAGATGGACAAGAGCACTATCCATGATGTTGTGCTTGTTGGTGGTTCCACCAGAATCCCCAGAGTTCAGCAGCTGCTGCAGGACTTCTTC
AACGGGAAGGAGCTCTGCAAGAGCATCAACCCTGATGAAGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCAATCCTCAGCGGTGAGGGGAACGAG*AAG
GTGCAGGACCTTCTCCTCCTGGATGTCACCCCACTGTCTCTTGGTCTTGAGACTGCTGGAGGAGTCATGACTGTGCTCATCACCAGGAACACCACCATCC
CCACCAAGAAGGAGCAGGTCTTCTCCACCTACTCCGACAACCAGCCTGGTGTGCTCATCCAGGTGTTTGAGGGTGAGAGGACAAGGACCA*GGGACAACA
ACCTGCTCGGCAAGTTTGAGCTCTCTGGCATCCCGCCTGCGCCCAGGGGTGTTCCCCAGATCACTGTCTGCTTCGACATTGATGCCAACGGTATCCTGAA
TGTCTCTGCTGAGGACAA*GACCACTGGCCAGAAGAACAAGATCACCATCACCAACGACAA*GGGCAGGCTGAGCAAGG*ACGACATTGAG*AAGATGGT
CCAGGACGCAGAGAAGTACAAGTCTGAGGACGAGG*AGCACAAGAAGAAGGTTGACGCCAAG*AACTCCCTGGAGAACTACGCCTACAACATGAGGAACA
CCAT*CCAGG*ACGAG*AAGATCGCCTCCAAGCTGCCTGCTGATGACAAG*AAGAAGATCGAGGACGCCGTTGACGCCGCGATCCAGTGGCTTGACGCCA
ACCAGCTCGGTGAGGTTGACGAGTTTGAGGACAAGATGAAGGAGCTGGAGGGCCTCTGCAACCCCATCATCGCCAAGATGTACCAGGGCGCCGGTGCTGG
CATGCCCGGAGGCATGGACGAGGACGCGCCGGCTGCGAGCGGCGGTGCTGGCCCCAAGATCGAGGAGGTCGACTAAGTTAGTCGCTTTTATATAGT*GAG
AAATACACTATACACCATTTTATTCAGTCCTGGGTGCCAATCATATCACCTGGGCT*GGAAGTTTTGTTGTACTTTTTGGT*CTGTAGCATCACGAGA*C
TTGTGTGTGTCGTGAACAATGCAATGATG*CATGTTTTGGCTCATTGTTGATTTCAGCTTAATG*CTTATTATTTGGACTACCCTACCCGTGTGATTTCA
Ttctgaattcttagcttaaaaaaaaaa
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