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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig29147  (registered. 2012)
Contig Information
Length 1341 bp
Clones alternative view 19 Clones [Download: TSV  ,  FASTA ]
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_RDr Root of dessiccated seed 2
Wh_VWD Shoot grown with dessication 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23℃ 3
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|14275750|emb|CAC40031.1|| P-type ATPase [Hordeum vulgare]
Score 394
Evalue 1.00E-135
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig29147 
TTTTTTTTTTAAATTAACCCGACTGGGAATTGTTTTATTATTTTTGCTAGCATATCACTGCTAAAATCGTAGACAAAAAAAAGTCTTTACACTGCATTCA
AATGCAAATAAATCCAAATCCAGCAATAGGATTCTCAAGCCGGAGTTGACTTCCCAAACAAATGCAGCACCAAAAAGCAATCCTGCAGCGCACACTTGCA
CTACAAATGAATTCAAGAAAATTAGCGGCTGGCGATGCAACAGAACCAAAATAGCAAATGCAGCCTGGATCCATCCTGAAATCACCCTTCTCCAGCTATA
TGTCATCAGGGCCGTTGGCGAGTGGCTTGTAACCATTTGGACTTCCAGAGATTTCACCTGACTTAACAGGAATGCACTTCAAGATAGCTCCAATAATCAA
GCTGATGGATCCTAGACCCACGCTCACCAACCAGAATTGCCAGCTGAGTGGAACAGTACTTGCAAAAGTGCCGAGAAACTCGATGATCACCACCTGGAAT
ACCACCGTCGCGCTTATTACCCCGAGGAAGACCCAATTGCCGATGAGACCGCGGAAAATGTTGATCTTCTCCATTTCCCTGCTGTTCACTTCGTTGAATA
CCTGGCAAAACACGAAGGAGTTGAAGATGAGCGTGTTGAGAACAGTCTTGGAATCTGGACCCTTGATGTTCAGAAGATTTTCCCCGGCGAACATGAGAAC
GCCAAGCACAACCAGCTGGTATATACTTTGCCCAATGATGTTTCTCCACATGACCTTGGTGATGAAGCTTTCCCCTCGCCCAGTAGGCGGCCTCTTCATC
ATTTCATCATTTGGAGGCTCAGTTGCCAGAGCTAAAGCCCCTAATGTGTCCATAATCATGTTCACCCACAGCAGCTGCACAGCAGTGAGAGGAGCACTCC
CTGCGATGTAAGAATGAGAACATGAATACCATGAGCCATTCGATGAAGAAAAAACCAAGATGTCAAATGAATACATCAATAATGTCTGTCACACCTGTGA
TGCACGCTGAGACAAAGTTGATCACCAAAGCAACAATGTTCACGGTCAACTGAAACTGCACGAACTTCTGGATGTTTATGTAAACCGCACGACCCCACCT
TGCGACGTTTATTATAGTTGTGAAGTTGTCGTCAAGTACTATGACATCAGCACTCTCCTTCGCAACCTGCACAAAATCGAAGATAGTGTCACCAATGTTC
ATGGAAAAATGAAATGATGATGGATTTGTTAGACGTTTATTTCTGTCGTGAGAGCAAAATATTACTCCAACCACAGATGACGAAAGAGAATTATAGGTTA
CGTAAATAAATAGGTTGTCATTGCCAACGGCCATTCTGTTA
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