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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig22610  (registered. 2012)
Contig Information
Length 884 bp
Clones alternative view 39 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 2
Wh_h Spike at heading date 5
Wh_r Root 2
Wh_SH - 2
Wh_KMP Shoot grown under continuous light 2
Wh_OKCS Seed DPA5 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 4
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XR Roots, 18 day old plants were grown hydroponically 4
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XF Seedling, infected with leaf rust 4
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115464739|ref|NP_001055969.1|| Os05g0501300 [Oryza sativa (japonica cultivar-group)]
Score 392
Evalue 4.00E-107
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig22610 
AACAACCGGAGCCGTCCTCCTCCTCCTCCCACCAGATCTCAGATCCGCGGAGCTCCAGTGCGCCTCCCATGGCGGTCAAGGTCTACGTCGTGTACTACTC
CATGTATGGTCATGTTGCTAAGCTAGCTGATGAGATCAAGAAAGGTGCTTCCTCTGTCGAAGGCGTGGAGGTTAAAGTGTGGCAGGTCCCTGAGATCCTG
AACGAGGAAGTCCTTGGCAAGATGGGCGCCCCGCCCAAGACCGACGTGCCAGTGATCTCCCCTCAGGAGCTGGCGGAGGCCGACGGCGTCCTGTTCGGGT
TCCCGACGAGGTTCGGCATGATGGCGGCGCAGATGAAGGCGTTCTTCGACGCGACGGGCGGGCTGTGGAGGGAGCAGAGCCTGGCGGGGAAGCCGGCGGG
CGTGTTCTTCAGCACGGGCACGCAGGGCGGCGGGCAGGAGACGACGCCGCTGACGGCGGTGACCCAGCTGACCCACCACGGCATGGTGTTCGTGCCGGTG
GGGTACACGTTCGGCGCCAAGATGTTCGACATGGACAAGGTGCAGGGCGGCAGCCCGTACGGCGCCGGCACGTTCGCGGGGGACGGGTCGCGGTGGCCGT
CGGAGATGGAGCTGGAGCACGCCTTCCACCAGGGCAAGTACTTCGCCGGCATCGCCAAGAAGCTCAAGGGCTCCTCCGCCTGAGTGCATGATCATTGATC
ACCTGATCACTGGTGGTGGTGGTGGTGGTGCTGCTATCTGTATCTGTGGAGCTTAAGTTTGATGTGTGGTGTGGGCACTGTTATGTTAATTATTATGGCT
TTGATTGAACCGGTTGTAAAGTTTGTAAGTGGATTTTGAATTTCATAGTATTATCATATCACTGCCATTGATACAAAAAAAAAA
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