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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25156  (registered. 2003)
Contig Information
Length 2221 bp
Clones 70 Clones [Download: TSV  ,  FASTA ]
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 1
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_OKCS Seed DPA5 1
Wh_PCDAM Anther at meiosis 9
Wh_RDr Root of dessiccated seed 30
Wh_SHDr Shoot grown with dessication 4
Wh_V483 Shoot grown under cold condition for 3days 3
Wh_VHS Shoot with heat shock treatment 6
Wh_VSCB Liquid cultured tissue 1
Wh_VWD Shoot grown with dessication 8
Homology (BLAST) Top Hit Os03g0276500 [Oryza sativa (japonica cultivar-group)] >gi|108707463|gb|ABF95258.1| Heat shock cognate 70 kDa protein, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113548183|dbj|BAF11626.1| Os03g0276500 [Oryza sativa (japonica cultivar-group)] >gi|125585779|gb|EAZ26443.1| hypothetical protein OsJ_009926 [Oryza sativa (japonica cultivar-group)] >gi|215706307|dbj|BAG93163.1| unnamed protein product [Oryza sativa Japonica Group]
Score 3103
Evalue 0
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25156 
CCCCTACCCGCGTGCTCCGCTCCAAGATCCAACCAATCCCGCAATTCCCTTCGAGGTTGTTTCTCCGCTCGACTTGTCGACGAGATCATGGCCGGAAAAG
GAGACGGGCCGGCGATCGGCATCGATCTCGGCACCACCTACTCCTGCGTCGGCGTCTGGCAGCATGACCGGGTGGAGATCATCGCCAACGACCAGGGCAA
CCGCACCACGCCGTCCTATGTCGCCTTCACCGACACCGAGCGGCTCATCGGCGACGCCGCCAAGAACCAGGTCGCCATGAACCCGATCAACACCGTCTTC
GATGCGAAGCGGCTCATCGGCCGGCGTTTCTCGGACTCGTCGGTGCAGAGCGACGCCAAGCTGTGGCCGTTCAAGGTGATCCCCGGCCCCGCTGACAAGC
CGATGATCGGGGTACAGTACAGAGGCGAGGACAAGCAGTTCTCGGCCGAAGAGATCTCCTCCATGGTGCTCAACAAGATGAAGGAGACGGCCGAGGCCTA
CCTCGGCACAACCATCAAGAACGCAGTCGTCACCGTCCCCGCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGATGCAGGCGTCATCTCTGGCCTC
AACGTCATGCGGATCATCAACGAGCCTACCGCCGCCGCCATCGCCTACGGTCTTGACAAGAAGTCCACCAGCGTCGGCGAGAAGAACGTGCTCATCTTTG
ATCTCGGCGGCGGTACCTTCGATGTCTCCCTCCTCACCATTGAGGAGGGTATCTTCGAGGTCAAGGCCACTGCCGGAGACACCCACCTGGGAGGCGAGGA
CTTCGACAACCGGATGGTCAATCACTTCGTGCAGGAATTCAAGAGGAAGAACAAGAAGGACATCAGCGGCAACCCGAGGGCGCTCCGGCGGCTCAGGACA
GCGTGCGAGAGGGCGAAGAGGACACTCTCCTCCACCGCCCAGACCACCATCGAGATCGATTCCCTCTTCGAGGGCATCGACTTCTACACTACCATCACCC
GCGCCCGGTTCGAGGAGCTCAACATGGACCTCTTCCGCAAGTGCATGGAGCCCGTTGAGAAGTGCCTCCGGGACGCCAAGATGGACAAGAGCACCGTGCA
CGATGTTGTCCTCGTCGGAGGATCCACACGTATCCCCCGTGTGCAGCAGCTCCTCCAGGACTTCTTTAACGGGAAGGAGCTCTGCAAGAGCATCAACCCT
GACGAGGCCGTCGCGTATGGAGCCGCCGTTCAGGCTGCCATCCTCACTGGCGAGGGCAACGAGAAGGTGCAGGACTTGCTCCTGCTTGACGTCACACCGC
TCTCGCAGGGCCTGGAGACGGCCGGAGGTGTCATGACCGTGCTGATCCCAAGGAACACGACAATCCCCACCAAGAAGGAGCAGGTCTTCTCCACCTACTC
TGACAACCAGCCCGGCGTGCTCATCCAGGTGTATGAGGGCGAGAGGGCGAGGACCAAGGACAACAACCTGCTCGGCAAGTTCGAGCTCTCCGGGATCCCA
CCGGCGCCCAGGGGTGTCCCCCAGATCACCGTGTGCTTTGACATTGATGCCAACGGTATCCTGAATGTCTCGGCGGAGGACAAGACCACCGGACAGAAGA
ACAAGATCACAATTACCAACGACAAGGGGCGGCTGAGCAAGGAGGACATCGAGAAGATGGTGCAGGAGGCCGAGAAGTACAAGGCTGAGGACGAGGAGCA
CAAGAAGAAGGTGGACTCCAAGAACGCCCTGGAGAACTACGCTTACAACATGCGTAACACCATCAAGGATGACAAGATCGCCTCCAAGCTCCCAGAGGCC
GACAAGAAGAAGATCGAGGATGCTATCGATGGTGCCATCACCTGGCTCGACAACAACCAGCTCGCCGAGGCTGAAGAGTTTGATGACAAGAGGAAAGAGC
TGGAGGGCATTTGCAACCCCATCATCGCCAAGATGTACCAGGGTGCCGGCGCTGAAATGCCTGGTGGCATGGATGAGGATGCTCCGGCCAGTGCCGCAGG
CGGCAGCAGCGGCCCAGGGCCCAAGATTGAGGAGGTCGACTAAATGATAGATTTAGATCGCCTACTATTCTGCTTGAATAATGTGTCTTTCATTGTACGG
TGGATTCTAGTATCGTTCTGCAGTTTTTCGTTCGGGCATATATACATTGCCCCATCTTATGTTTAAGTTGATATTGAAACACGATTATTTAGTACTAGAC
TAGAAGACAGTAAAAAAAAAA
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