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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25193  (registered. 2003)
Contig Information
Length 1430 bp
Clones 77 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 4
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_RDr Root of dessiccated seed 5
Wh_SHDr Shoot grown with dessication 1
Wh_V4816 Shoot grown under cold condition for 16days 23
Wh_V483 Shoot grown under cold condition for 3days 39
Homology (BLAST) Top Hit hypothetical protein LOC310926 [Rattus norvegicus] >gi|32264609|gb|AAP78751.1| Ac1147 [Rattus norvegicus] >gi|32492558|gb|AAP85367.1| Aa1011 [Rattus norvegicus] >gi|32492570|gb|AAP85373.1| Aa1262 [Rattus norvegicus] >gi|33086544|gb|AAP92584.1| Ab2-057 [Rattus norvegicus]
Score 329
Evalue 1.7184e-28
Total Hit Count 79
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25193 
ATTCTCATATTGCTACTTGAAATATCCATGTCCCTTACAATCAAATCGCATTTAAGTGTATTACAAAACATTTTTCGCACAGCGTGCGGGCTGTCATCAA
CTTAGTGAACATGCTCTGGACTTGGGAGTTTGTGATTAGTTAAGAGTGACGAAGTTGTACGTAGATGATGCAAAAGGCGAACACATTGAAAAAAGAAGTA
TTTATTACATTGATGATACATCATACATGTAGCACATCAAGGAAACGAAAAATACTAGAACATGAACTGAAAAGAAATACAGACGGGGATAGATGATACA
GACGCCCATTAAGGAAGGAACATGGACATGAGCGAAACGCCGGTGTTGGCCTTCCGGGCGATGTTAAGCTAGAGCCTAGAAGTGTAAAGTCACGAGGTGA
GCTTCATCTTGTAAGCCAGCACATGAACTAGAGGTGATCATGGGTGAGCAGGGATCCCGGGAAGGGCAGGAAGCGCCACCAGCGGGCCGTTAGTGGTGCT
GGTACCGGTAACGGTTCCCACAGGCGGCAGGTCAGGCAACCCCAAAATCTTCTCCTCGCCGACGCCACCACCGGCGGCCCCGGCACCGCGTGCCGTTGCG
AGTGCCTGGTCCTTCTGGTTTAGCTCCCTCCCGTCGCAGTACGCGAGCACCAGCAGCAGCAGGAGGGCGACGGCGAGGCACTTTGCCATATTGCTAGCTG
GGAGGCTCCGCTAGCACTTATGAGGAGATTGTCTAGCTTGTGCGGCTTTGTGATAGTGTTGGGTGGCTGTGCCTGTCAGACTGAGAGCTCTTTCTTGATT
CTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGA
GCCATCCCTCCGCAGCTAGCTTCTTAGAGGGACTATCGCCGTTTAGGCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGC
CGCACGCGCGCTACACTGATGTATTCAACGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTGATGGGGATAGATCATTGC
AATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCG
ATTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGGGGGCGGTTCGCCGCCCCCGACGTCGCGAGAAGTCCATTGAACCTTATCATTTAGAGGAGTG
GAGAAGCTGAAACAATCAGCCGTGGATCAATCGTCATAGTTATACGATGGATGTGTTTTTGTCATACTAGTATTACTAGCTAATATACAGAAGCAGTCAC
CAGTCAGTGAGCAATGTCGTTTCGATGACC
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