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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig23270  (registered. 2007)
Contig Information
Length 1558 bp
Clones 16 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 2
Wh_DPA20 Seed DPA20 1
Wh_EMC Dormant seed with cold treatment after water absorption 4
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_RDr Root of dessiccated seed 3
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit putative WD-40 repeat protein [Oryza sativa Japonica Group] >gi|125597766|gb|EAZ37546.1| hypothetical protein OsJ_021029 [Oryza sativa (japonica cultivar-group)]
Score 1057
Evalue 6.15049e-175
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig23270
GGAAAATGTGTCAACACAAAATACACAATGGCATCTCAATCTAATCCTGATCAACACCTCATCCACAAAATGTTCTACTCTTGGCTTATTCTCGGTGTAC
CAAAAAATCCCTAGCAGTTGCTCGATGAAGGGCAAGATTTTTCCCACGGCGCAGTTAACTACTCATACAAGCCAGCCACACTTAAGTCGGACACCGGCTT
TGACGAACAGACGCAAGGCAAGGCGGAAAGAGCAGCTTTGAGGATAACACAACAGCATCTCATCCAACGATGTAATCCTACTCCCCGGCCTTCTCCTCCT
TGGCAATGTGGAAGCCTTCGATCTTACACGCAATCTCCTCTGCTCCAGCCTTGGGTTTACCATTTGTATCGACCGCCTCCTCAGCATCCACGTTAGGTGG
GCTCAGCTGCCAGATCCGAATAGTACCATCTTCCGACCCTGAGGCGTATGATTCGCCACCAGGTGCAAACCGGACGCAGTGAACTGGACCATGATGCCCT
TTGTTACAGGTTATTTCTTCACCGGTGAGGAAATCAAATACATGAACCCACATATCTTCTCCTCCAGCAATGAATTTGCTCCCGGACTTCGGTTCAAGTG
AAGCTGACTCCACAATAAACGACATATCATAGCTTTTAACAAGCCCAAAGTGATTAGCATCCCAAAATTTTACACTTGAGCCATCAGCTGTGGTGATGAA
CCTGCCATCCTGGCTTACTTCTGCACTGGTAACAGGTCCCTTGGTTTCAAGAGTTTGGACAATTTTTTCACTCCTCACATCCCATAACCTTACTCCACCC
GTATCAGTGCAGGAACTCAGTATAGTTTGGTCATTATGAAGCCAAGCAACAGTTCGGACAGAACCAGGTGATTTGTCAAGTTCTTTCGGAGCAACATCTG
GTTTGTTCAAATCGTATACACGCAAAATCTTTTCCATACCTCCAGTAAGCAACAGGTGGGTGTCCTTAGAAAAGGGCACATGCACGGACTATATGCTTGT
GTTCAAATGAATGTAGTTCATCACCTGTTAGTGCATCCCATACTTTAGCTGAAAAGTCTGCTGAACCAGAGGCAGCACGCAGAGCATTTGTGTCAAGGCA
ACAGCTCCAAACAGCACCTTTATGACCTTCAAAAGTCCCAATCCAATCTCCAGTCTCACCATTACGAAGCATTGGATTTGAGTCCTTGCTGGCGCTGATG
AGGAAGTAGCCGTCGGGCGTGACGGGGCTGTAGAACAGGTCGACGACCGGCCGCGAGTGGCCGTGGCAGACCAGCGGCACCGCCGCCTTCTTCTTCTCCA
TCTCAGCCCCTCCCCACTCTAACCCTAACCCTATCGACCGGCTCCGGCGGCGCGCGATCGGCTCCCAACCCTAGCCCCTACGAACGAACCAAGAGAATCG
AATCGAAGCAAGATAAATTGGGGGAAGTCAGATGTGAATTGTGGCGCGGATCGGCGGCGGGGGCGGATGGGGACGAGGATGATCTGGGTCAGTGGGGGTA
GATTTGTACGCGGATTTATTATTTGTTAGAGCAGTGGGTTCGAGCCCGGAGGCCGGCC
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