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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig10166  (registered. 2012)
Contig Information
Length 2280 bp
Clones alternative view 475 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 3
Wh_dL Crown of seedling 6
Wh_e Seed DPA10 3
Wh_f Spike at flowering date 5
Wh_h Spike at heading date 8
Wh_oh Pistil at heading date 5
Wh_r Root 14
Wh_yd Spikelet at late flowering 17
Wh_CSEC Callus 25
Wh_DPA20 Seed DPA20 9
Wh_EM Dormant seed with water absorption 11
Wh_EMI Dormant seed with water absorption after breaking 22
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 9
Wh_KMP Shoot grown under continuous light 9
Wh_KMV Shoot grown with continuous light after cold treatment 7
Wh_MS Seed DPA5 of DT3DL CS wheat 6
Wh_OKCS Seed DPA5 11
Wh_PCDAM Anther at meiosis 8
Wh_RDr Root of dessiccated seed 5
Wh_SHC Shoot grown with cold treatment 12
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 7
Wh_VABA Shoot with ABA treatment 9
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 26
Wh_VWD Shoot grown with dessication 11
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 6
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 4
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 10
WH_XN Leaves, plant was grown at constant 23Ž 9
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 7
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 17
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 9
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 7
WH_XT Roots, 18 day old plants were grown hydroponically 8
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 10
WH_SP 21
WH_XA Root 17
WH_XB Root 14
WH_XC Root, treated at 50 microM Al for 6h 17
WH_XD Root, treated at 50 microM Al for 6h 14
WH_XE Seedling, infected with leaf rust 12
WH_XF Seedling, infected with leaf rust 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 15
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 14
WH_XV Leaves, plant was grown at constant 23Ž 1
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|255573627|ref|XP_002527736.1|| heat shock protein, putative [Ricinus communis]"
Score 849
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig10166 
TTTTTTTTTTAACCCAAACCAATTCATTCATAGAGATAGGGCGGATGAGCAAACCGGAATCTAAGTTCCAGCCACCACTCAGTTCCAATTCCAAAGGGTA
TTATAATAGAGATAGATAGATAGATAACAAAGTACTAGCAGCACCTCGAGCATTCGGTGTAAAAAACACACAAATCTGGATCAAACTTGTTTCACCCAAC
AGATATCTTGATGCCTATGTATGTGTATCTCAAACACCCAGAAGCACTAGATACCAAGTATCGCAGGTAGGCAACCACGCACAGCTGCTTACTTGCCACC
ACCGATTTCCTTCACAGCGCAGATCTGTTCTTCACCCATGGCGGACATCACAGACAGGATCAGGTCCTTGCCATCAGCAAATCCAGTCTTGATCTGGCCA
AGCAGAACATCATCAGTGGGAAGCTTCAGGTCATCCTTCGTGTTGCCACTCTCAGTTAGAAGGCTGACATATCCATCATCAGTTATGTCAATCAGCTGAT
AATCTTGGCGGTCAACATGGGGGACGTCACAGTTGTGGGATGAAGGAACGATATCCTCAAGCTTCTTTCCATTAAAGATGTCAATGGCAACAAAGTGACA
CTTTGCGTGACCATGCTTCCCAGTCTTGGAGGTGGAGACCTCAACAACCTTGCAGGGACGGGCCTTGATGACGATGTGTCCACCCTTGCGGATGGCGCCG
GCCTGCTGCGGGTAGGTCTTGGAGGCGCCGGAGTCGGCCTTGGACTCGAAGTGGTGCTCATCGGTGTCCGACATCTCCGACGATCCTCCTGAGTCCGGGG
GCAAGTGGGGTGGTGGAGACGAGACGCAGCGGCAGCGAGGGGCGGATGGATGGATCTCCTCCCCCTCCTCCTCAACCCGCCGCCGCTTCTCCTCCTCCGG
AAGAAAAACAGAGAGCTTCAAGTTCTCCGGAGCGAGAGAGATGGCGGCGAAGGGCGATGGGCCGGCGATCGGCATCGACCTCGGCACGACGTACTCGTGC
GTCGGCGTGTGGCAGCACGACAGGGTCGAAATCATTGCCAATGACCAGGGCAACCGCACCACGCCGTCGTACGTGGCCTTCACCGACTCCGAGCGCCTCA
TCGGCGACGCTGCCAAGAACCAGGTGGCGATGAACCCCATCAACACCGTCTTCGATGCCAAGCGTCTCATTGGCCGGAGATTTACCGATTCAACTGTCCA
GAGTGACATTAAGCTGTGGCCCTTCAAGGTTGTTGCTGGACCTGGTGACAAGCCTATGATTAATGTCCAGTACAAGGGTGAGGAGAAGCAGTTTGCAGCT
GAGGAGATATCCTCTATGGTCCTCATCAAGATGCGTGAGATTGCAGAAGCTTTCCTTGGCAGCACTGTGAAGAATGCTGTTGTCACTGTACCTGCATACT
TCAATGACTCGCAGAGGCAGGCTACCAAGGATGCTGGTGTCATTGCTGGCATCAATGTCCTTCGTATCATCAACGAGCCAACAGCTGCTGCCATTGCTTA
TGGTCTTGACAAGAAGGCTTCCAGTGTTGGTGAGAAGAATGTCCTCATCTTTGATCTTGGAGGTGGTACCTTTGATGTCTCTCTTCTCACCATTGAGGAG
GGCATCTTTGAGGTTAAAGCCACAGCTGGTGACACTCATCTTGGTGGTGAGGACTTTGATAACAGGATGGTCAACCACTTCGTCCAGGAGTTCAAGAGGA
AGAACAAGAAGGACATCAGTGGCAACCCGAGAGCTCTTCGGAGGCTGAGGACATCCTGTGAGAGGGCAAAGAGGACTCTCTCCTCCACTGCACAGACCAC
CATTGAGATTGACTCGCTGTTTGAGGGCATTGACTTCTACTCCACCATCACCCGGGCCAGGTTTGAGGAGATGAACATGGATCTGTTCAGGAAGTGTATG
GAGCCTGTGGAGAAGTGTCTCAGGGATGCAAAGATGGACAAGAGCACCGTGCACGATGTTGTCCTTGTTGGTGGTTCCACTAGGATTCCCAAAGTGCAGC
AGCTTCTCCAGGACTTCTTCAACGGCAAGGAGCTGTGCAAGAGCATCAACCCTGATGAGGCTGTTGCGTACGGGGCTGCTGTCCAGGCTGCCATCTTGAG
CGGAGAGGGCAACGAGAAGGTCCAGGACCTGCTGTTATTGGATGTCACTCCTCTTTCTCTTGGTCTGGAGACAGCTGGGGGTGTGATGACAGTTTTGATT
CCAAGGAACACCACCATCCCCACCAAGNNNNAGCAGGTCTTCTCCACCTACTCGGACAACCAGCCTGGTGTGCTCATCCA
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