Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6825  (registered. 2012)
Contig Information
Length 1678 bp
Clones alternative view 447 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 4
Wh_SH - 3
Wh_KMP Shoot grown under continuous light 3
Wh_KMV Shoot grown with continuous light after cold treatment 12
Wh_OKCS Seed DPA5 2
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 10
Wh_V483 Shoot grown under cold condition for 3days 19
Wh_VABA Shoot with ABA treatment 13
Wh_VHS Shoot with heat shock treatment 22
Wh_VWD Shoot grown with dessication 11
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 16
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 18
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 16
WH_XN Leaves, plant was grown at constant 23Ž 47
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 13
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 47
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 20
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_SP 3
WH_XE Seedling, infected with leaf rust 36
WH_XF Seedling, infected with leaf rust 47
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 31
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 29
WH_XV Leaves, plant was grown at constant 23Ž 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 10
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|12643756|sp|Q40073.1|RCAA_HORVU|RCAA_HORVU RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase
Score 924
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6825 
GTCATTCATCACTGATCACCAGCACAGCCGCGCATCCACCGCTGCTAGCAAGGTCGAGCAAGCAGCACAGAGATGGCTGCTGCCTTCTCCTCCACCGTCG
GTGCCCCGGCTTCTACGCCGACCAACTTCCTCGGGAAGAAGCTCAAGAAGCAGGTGACCTCGGCCGTGAACTACCATGGCAAGAGCTCCAAGGCCAACAG
GTTCACGGTCATGGCAGCGGAAAACATCGACGAGAAGAGGAACACCGACAAGTGGAAGGGTCTTGCGTACGATATCTCCGACGACCAGCAGGACATCACC
AGAGGGAAGGGCATCGTGGACTCCCTCTTCCAGGCGCCCACTGGCGACGGCACCCACGAGGCCGTCCTCAGCTCATACGAGTACGTCAGCCAGGGACTCA
AGAAGTACGACTTCGACAACACCATGGGAGGCTTCTACATCGCTCCTGCTTTCATGGACAAGCTTGTTGTCCATCTCTCCAAGAACTTCATGACCCTGCC
CAACATCAAGATCCCACTCATCTTGGGTATCTGGGGAGGCAAGGGTCAAGGAAAATCCTTCCAGTGTGAGCTTGTCTTCGCCAAGATGGGCATCAACCCA
ATCATGATGAGTGCCGGAGAGCTGGAGAGTGGCAACGCCGGAGAGCCAGCCAAGCTCATCAGGCAGCGGTACCGTGAGGCTGCAGACATGATCAAGAAGG
GTAAGATGTGCTGCCTCTTCATCAACGATCTTGACGCCGGTGCGGGTAGGATGGGCGGGACCACACAGTACACCGTCAACAACCAGATGGTGAACGCCAC
CCTCATGAACATCGCCGATGCCCCCACCAATGTGCAGCTCCCAGGCATGTACAACAAGGAGGAGAACCCACGTGTGCCCATCGTCGTCACTGGTAACGAT
TTCTCGACGTTGTACGCCCCTCTGATCCGTGATGGTCGTATGGAGAAGTTCTACTGGGCTCCCACCCGCGACGACCGTATCGGTGTCTGCAAGGGTATCT
TCCAGACCGACAATGTCAGCGACGAGTCCGTCGTCAAGATCGTCGACACCTTCCCAGGACAATCCATCGACTTTTTCGGTGCTCTGCGTGCTCGGGTGTA
CGACGACGAGGTGCGCAAGTGGGTGACCTCTACCGGTATCGAGAACATTGGCAAGAAGCTGGTGAACTCGCGGGACGGACCAGTGACCTTTGAGCAGCCA
AAGATGACAGTGGAGAAGCTGCTAGAGTACGGGCACATGCTCGTCCAGGAGCAGGACAATGTCAAGCGTGTGCAGCTTGCTGACACCTACATGAGCCAGG
CAGCTCTGGGTGATGCTAACCAGGATGCGATGAAGACTGGTACCTTCTACGGTAAAGGGGCACAGCAAGGTACTTTGCCTGTACCGGCAGGATGCACCGA
CCAGACTGCCAAGAACTTCGACCCAACGGCGAGGAGTGACGACGGCAGCTGCCTTTACACCTTTTAAGCATGCCAATTTAATATCTGATGTTTTATCCTT
TGTACCTAAGTACCGCATCGCATCCAAGCGATTGCTGGGCATGTTTTGTTAATATATAAAGATATTGAGTATACCTATTTGGTAAAGACAAATAGGACTA
CTTATCATTTGTCACTCTCAGTATTCATTCCTTCAGTGGAGACTGCTTCTGCTTTGTTGCAAACAGAACAAAAAAATA
page-top