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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5482  (registered. 2012)
Contig Information
Length 1322 bp
Clones alternative view 11 Clones [Download: TSV  ,  FASTA ]
Wh_SHDr Shoot grown with dessication 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XE Seedling, infected with leaf rust 4
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115461971|ref|NP_001054585.1|| Os05g0137300 [Oryza sativa (japonica cultivar-group)]
Score 511
Evalue 6.00E-143
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5482 
TTTTTTTTTTCAGGGGCGTGATTATCTACAATGTATTATTGTGCAGCAAAGTTGTAGTAGTACATTTGCCAGACAAAACAAGTTGTAGGAGTACAGGTCT
GTAAATACCAACCTGAACCAGGTCCAGGTAACCATCGTATCAGTTCATGCCCACGTCACCATCTCCGATGAAGCCTGCCACGATGGTGCCAACATCATCC
AAGCCTACACCAATGCAGATGGGACTGTTCTTCTGTACAGAGCCCTCACTCCGAAGCCGCACATTTGGGCCTAGCCTGCATTTCCCCAAACATTTGCAAC
CGACCACCATGCCGCCCGTGCCGACCTCCGTCTCGAACTCCTGCAGGACAGCGAGCGAGCCCGCCTTCTTGCATTTGCCGCCCATGCAGACCTCGATTCT
GTTCAGCACTGGTTTTTCGACAACCGCAATGCTGGTGGCAGTGCACTGCATTGCATTTGCAGACCCGGAAAAGATCTGAGCATCCAGTGCAACGGAGTCT
GGGATTTGAGGCACTATGATGGGGAAAACTGTGCTTGCAGGTGGTGTTCGAGGCGCAGAAATGGTGGCACAGCAGCTCATTCTGACGACTTCCCCTTCAC
ACTCACTGTTGCTGGACTCCGATGAGCATGAGCTGTCTTCATCCTTGCAGGAATTCAGTGTGGCCATCCTCTTCTCTTCCTCCTTTTTCATCTTCATGGC
CTTCTTTGCAGCTTTCTTTTGTTCCTTCTCCCTCTTCTTCATGGCCTTCATCGCAGCCTTGTCAAAATCCATTGCCGGAGCTGTTGCGATGTTGGATGCA
GCAATTTGGGGCACCGACATTGACATCACCATTCCTTGCTCAACTGCAGGCACCGATGTGGTGGCAACACACCTCATTTTCATGGATTGCCCTTCCTCGC
ACTCACTCTCGCTCGATTCAGAGGAGCCATCTCCACAGTTCATCGCAGCCTTCTTGGCTTCCTTCTGCTGCTTCTTCAGTGCTTTCATCGCAGCCTTCTC
CTCTTTCTGCTTCTTCTTCAGCTGGTCCTCTGCATCCTTCATCTGATTCAACTCCTGTAGCAGCAGCTCAGTGGCTTCCGAGAGGATCTTCTCCTTGGCT
GGGTCGCCGGCGACAAGGCCCATGGCACGGAGCTTGGTAAGATCCCTCGCCGCCGCCTCCACCGCCTTCCGCGGCGCCTCGTAGTACCTGAGGTGCGCCT
CGTCGGCGAATCCCCCGCCTACGCCTCTGCCTCCGCGGCCGACGCAGGACACCCTAGCCGGCATCCCACTCCTCCTCTCCCTCGGGACCACCGGATACCC
CGACGCCAACGATCGCCGGAGG
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