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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig15779  (registered. 2002)
Contig Information
Length 1058 bp
Clones 31 Clones [Download: TSV  ,  FASTA ]
Wh Spike at meiosis 4
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 1
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 8
Wh_oh Pistil at heading date 2
Wh_r Root 4
Wh_yf Spikelet at early flowering 8
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os12g0236400 [Oryza sativa (japonica cultivar-group)] >gi|585337|sp|Q08479|KAD1_ORYSJ RecName: Full=Adenylate kinase A; Short=AK A; AltName: Full=ATP-AMP transphosphorylase A >gi|391877|dbj|BAA01180.1| adenylate kinase-a [Oryza sativa] >gi|77554109|gb|ABA96905.1| Adenylate kinase A, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113648969|dbj|BAF29481.1| Os12g0236400 [Oryza sativa (japonica cultivar-group)] >gi|125536202|gb|EAY82690.1| hypothetical protein OsI_37905 [Oryza sativa Indica Group] >gi|125578925|gb|EAZ20071.1| hypothetical protein OsJ_034280 [Oryza sativa (japonica cultivar-group)] >gi|215697656|dbj|BAG91650.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215765406|dbj|BAG87103.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1164
Evalue 1.64569e-125
Total Hit Count 500
Registered year 2002
Contig Sequence     [ Download ]
>Contig15779 
ttttttttTTATCTCTGTACCGCTAATAAAAACTT*CTCATTCCAAACAAAATTATTCAGAAAAATTCTGAG*CTAGCAAAAGCTGTAATGAAATTGTGC
AATAGTGCACATGCAGACAGAAAATGAGAAACATAGGATGCCGGTATGAGTTTAAAACTTGTAAGAAACCCAGCCGGGGTTTTGTTACATGTCACTTTCA
AGGTGAAACAGGCCCTTCACGAAAGAGCTTTCTGCACCTCGGCGGTCACTTCCTTTGGTGGTTTCTCCGCATGAAGATTTGCCACTAAGCCATTCTTGGA
GTAGTAGTCAATCACAGGTTCAGTTTGTATGTGGAAAGCTTCAAGCCTTGACTTCAAGACCTCAGCTGTGTCATCTTTTCTTTGAATTAAGGGTTCTCCC
GAAACATCATCAACTCCTGGAGTCTTAGGAGGAGCAAATTTTGTATGGTAAGATCTACCACTCGATGGGTGTATCCAACGGCCAGTAA*TTCGTTCTTCC
AATATTGCATCATCAATTGCAAAATTTAGAACCTTGTCAACCTTAGCACCTTGCTTTGCCAGCATTTCATCGAGC*TTTTGTGCTTGAACAACAGTTCTA
GGGAAGCCATCAAGGATAAAA*CCTTTTTGACATGAAGGCTTTTTCATGGCTTCATCAATAATCCCAACAACCAAGTCATCTGAAACAA*GCTCTCCCTT
GTCCATAGCTTCTTTAGCCTTGATACCCAG*AGG*AGTCTTAGCGGCGACAGCAGCCCTCAGCATATCGCCAGTGGCTAAATGGCACAAACAATATTCAT
CCTTAATAAGGGGAGACTGTGTTCCCTTT*CCAGAGCCAGGTGGACCGACGAGGATGATGCGCTTGTCGGGCTTGGAGCTGCACTTGGCGCGGCGGAGCA
GCTCGGTCATGAGCTCCACCGAAGGCACGT*CCTCGATGTTCGTCGCCAT*CTCTTCCT*CCGCCGGCCGCAACAACGGGAACGACTCGACTCACGTGCC
TGCTGTTTGGCGTGCGGCGCACAAGTCCTATCTCTCCCTCGTGCCGAattgcctgcag
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