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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig23512  (registered. 2007)
Contig Information
Length 853 bp
Clones 18 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 2
Wh_DPA20 Seed DPA20 2
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 2
Wh_RDr Root of dessiccated seed 2
Wh_SHDr Shoot grown with dessication 2
Wh_VSCB Liquid cultured tissue 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit calmodulin [Zea mays] >gi|20186|emb|CAA46150.1| calmodulin [Oryza sativa] >gi|3336950|emb|CAA74307.1| calmodulin [Zea mays] >gi|4103961|gb|AAD10246.1| calmodulin [Phaseolus vulgaris] >gi|117670150|gb|ABK56718.1| unknown [Hordeum vulgare] >gi|194706732|gb|ACF87450.1| unknown [Zea mays] >gi|195605834|gb|ACG24747.1| calmodulin [Zea mays] >gi|195611022|gb|ACG27341.1| calmodulin [Zea mays]
Score 761
Evalue 6.35091e-79
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig23512 
GCATTTTGGAGCTGAACACAACCCAAGCATACAAGCAAACCGCAGGGCAAAACCGAGATTTGCACAAAGCCCCTAAATTCCATGATAAGACTAGAAACCA
GGTAAATCCGATGCTGCTCCCCACGACTACACCGCTACAAGATAACCCGACCAGCTACCCAACAGGCAACAGTACTTAAAAAACATAGCACAAAATACAA
CCTTGCGAGTCTGTCTGGCATTCCATTCCAATCCACTTGAGAGCAAATTTTAAGCTTATTTCGTGGGAGGACACCCCCTGTCCCGCCACCTCACTTGGCC
ATCATGACCTTGACGAACTCCTCGTAGTTGATCTGGCCGTCGCCGTCCACGTCCGCCTCCCGGATCATCTCGTCCACCTCCTCGTCCGTCAGCTTCTCCC
CGAGGTTGGTCATCACGTGGCGCAGCTCCGCCGCCGAGATGAAGCCGTTCTGGTCCTTGTCAAACACGCGGAACGCCTCCTTGAGCTCCTCCTCCGAGTC
AGTGTCCTTCATCTTCCTCGCCATCAGGTTCAGGAACTCCGGGAAGTCGATGGTGCCGTTGCCGTCCGCGTCAACCTCGTTGATCATGTCCTGCAGCTCC
GCCTCCGTGGGGTTCTGCCCGAGGGACCGCATCACGGTTCCGAGCTCCTTGGTGGTGATGCAACCGTCGCCATCCTTGTCGAAGAGGCTGAAGGCCTCCT
TGAACTCGGCGATCTGCTCGTCGGTCAGCTGGTCCGCCATGAGGGAGGGAGGAGGCTTCGAGAAGGTGCGCACAGGACACGGGGGCGGCTGCGCCGGAGG
GGAATAAACGGGGCGCGGTGGTTGGCGTTCCTGTCCGTGCCCCCCGTCCGTGG
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