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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_OKCS_all.Contig1677
Contig Information
Length 761 bp
Tissue Seed DPA5
Clones 3 Clones [Download: CSV  ,  FASTA ]
whok15b05    rwhok2f09    rwhok15b05   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)]
Score 663
Evalue 1.18941e-67
Total Hit Count 351
Registered year 2003
Contig Sequence     [ Download ]
>Wh_OKCS_all.Contig1677 
CGCAAGGAGTAAAATCCATCTTTATGACAAGAACTCACAAGCATAAGATTCTCCCAGGCGGGCAGATAATTTAAAAGCTCAGACAATAACCATTGTACCA
GAATAGCATGCGATCTACTTCAACGAAGTCTTGGATAACAAACACAGGGGGGTATCATAATTCAAAACTGTAGCCAAATTCTACTACCGAACACGATTGC
ATAGAGGGGACTTCAACTGATCAGAATTCGGCAGGAACAGTTCCTGCAACCTGGTCCAGATCACGCCTTCCCTGGGAGGTGATGAGCCTTCCACCCTTGG
GGTCCACATCAATGATGCCCATCTTCTGCAACTCCTGGAGGATGTTGCGGGACACAGCACCACTGCTCTTGCAGAAGTGCGGTGGGCGTGAACCATTCCT
CTGACGGCCACCGTAGATCTTCTGGAAGCCGCCGATCCCAATTCCCTGCCTCAGGTAGATCTTCCTTGCCATCGAGGCAGCCCTGATGTAGTACCAGTCA
GCATCAGAAGGTGGAAGCTCCTTGAACCTTGCAGTCTTGACAATGTCAACCCACTCCGGAAGCTCCATCTTGCCGGAGCGCTTGAGGTGCGCGGAGTAGG
CCTTGACGAACTCGTGGGGGTTGACATCCTTCACCGTGCGCGCCGTGGAGGCCGCGGTCTCGGCTGCGGGAGCGGGCACGGTCGCCATCCTGTGCTCTCG
CCGACGGCGGCGCTGTCTTCAGGGAGGAGGGAGAGGTGTGCGCGCCGCTGCGGCTGCGAGG
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