Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig2953  (registered. 2012)
Contig Information
Length 654 bp
Clones alternative view 100 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 8
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 1
Wh_oh Pistil at heading date 5
Wh_r Root 1
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 3
Wh_EM Dormant seed with water absorption 4
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 4
Wh_OKCS Seed DPA5 2
Wh_VABA Shoot with ABA treatment 1
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XT Roots, 18 day old plants were grown hydroponically 7
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XA Root 2
WH_XB Root 2
WH_XC Root, treated at 50 microM Al for 6h 5
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XF Seedling, infected with leaf rust 5
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 6
WH_XV Leaves, plant was grown at constant 23Ž 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115441855|ref|NP_001045207.1|| Os01g0918300 [Oryza sativa (japonica cultivar-group)]
Score 181
Evalue 4.00E-44
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig2953 
TTTTTTTTTTGATGAGAAACCAAATGAGTTTTTTTTTTTTTAGGAACACAACAAGGCATGATATATTAGGCAATGGATGATACTTCAGTCACGACATCAA
CAGTACTCCGATGTTCTTTCACCTCCAGACCCCCTCAGGTTATGGCACAGAACCATAGCCTCACAAGTTCTTTCACTTCTTACATTTTACTCTAGTTCTA
AAGGTAGCATACGACATAGAACAGCCAGGCTGCAAGCAAGCTCCTTCTAAGGGCGAGGAAAGCACCCTCCGGTCTGGTGAAGCATGGCGTCGATCTCGTC
GCCTTCCTCCATCTCCAGCTCATCAGGGGTCTGCTCACCACGGAGCCTACGACCATCGAAAAGGAAAGCAATGGAGTTGAGATCCACAGACTGACGGTCG
CAGTAGGCGTTCATCAGCTTCTTCAGCTGTGTCGATCTCTTGATGCGGAAGAAAACCTCATTGCCATCCTGCCCCTTGACCTTGAGGTTGATGTGGGCGC
CTCCGCCGTCGCCCGCGGGCTTCTTGTCCTCATCCGCCGTCACGCCCGACATCTCCGCCGACTCCTCTGTGCTGTGCCGCGCCTCGAGAGGCGGGGTGGG
GTGAGGAGCAGGGTAGGGGATCCGAGCAAGAGCAGAGGAAGAAGACGACCCGAG
page-top