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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_KMV_all.Contig2532
Contig Information
Length 1655 bp
Tissue Shoot grown with continuous light after cold treatment
Clones 16 Clones [Download: CSV  ,  FASTA ]
whkv2c21    whkv2g18    whkv2i16    whkv2n22    whkv4c22    whkv7i17    whkv11o11    whkv15e13    whkv19l23    whkv20c18    rwhkv2g18    rwhkv2i16    rwhkv2n22    rwhkv4c22    rwhkv11o11    rwhkv20c18   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os11g0171300 [Oryza sativa (japonica cultivar-group)] >gi|78099750|sp|Q40677|ALFC_ORYSJ RecName: Full=Fructose-bisphosphate aldolase, chloroplastic; Short=ALDP; Flags: Precursor >gi|62732953|gb|AAX95072.1| Fructose-bisphosphate aldolase class-I [Oryza sativa (japonica cultivar-group)] >gi|108864046|gb|ABA91630.2| Fructose-bisphosphate aldolase, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113644566|dbj|BAF27707.1| Os11g0171300 [Oryza sativa (japonica cultivar-group)] >gi|125533557|gb|EAY80105.1| hypothetical protein OsI_35277 [Oryza sativa Indica Group] >gi|125576361|gb|EAZ17583.1| hypothetical protein OsJ_031792 [Oryza sativa (japonica cultivar-group)] >gi|215740860|dbj|BAG97016.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1864
Evalue 0
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_KMV_all.Contig2532 
AGGTGTGTCAAAGAAGAGGGTAGCACCTGATCTGCTTGCCTCCAGAAACAATGGCGTCTGCTACTCTCCTCAAGTCGTCTTTCCTTCCCAAGAAGGCCGA
ATGGGGCGCCACGCGCCAGGCTGCCGCCCCCAAGCCGATGACCGTCTCCATGGTTGTCCGTGCCAGCGCGTACGCCGATGAGCTTGTCAAAACCGCGAAA
ACCATCGCATCGCCAGGCAGGGGTATCCTTGCCATGGATGAGTCGAATGCCACCTGTGGCAAGAGACTCGCCTCGATTGGCCTTGAGAACACTGAGGCTA
ACCGCCAGGCTTACCGGACCCTCCTTGTCACTCCACCAGGATTGGGAAACTACATCTCTGGTGCTATCCTCTTTGAGGAGACCCTCTACCAGTCGACTGT
TGATGGCAAGAAGATTGTTGACATCCTTGTCGAGCAGGGAATCGTTCCCGGTATCAAGGTTGACAAGGGTCTTGTGCCACTTGTTGGTTCCAACGATGAG
TCATGGTGCCAAGGTCTCGATGGCCTTGCCTCCCGTGAAGCAGCATACTACCAGCAAGGCGCCCGCTTCGCCAAGTGGCGCACTGTTGTCAGCATTCCTA
ACGGCCCATCTGAGCTTGCTGTCAAGGAAGCTGCCTGGGGTCTTGCCCGTTACGCGGCCATCTCACAGGACAATGGGCTGGTGCCGATTGTGGAGCCTGA
GATCATGCTCGACGGTGAGCACGGCATCGAGAGGACCTTCGAGGTCGCACAGAAGGTGTGGGCGGAGACCTTCTACTACATGGCTCAGAACAACGTCATG
TTTGAGGGCATCCTCCTGAAGCCAAGCATGGTGACCCCTGGTGCTGAGTGCAAGGACAGGGCCACCCCTGAGGAAGTAGCCAGCTACACCCTCAAGCTCC
TCCAGAGAAGGATCCCCCCTTCCGTCCCCGGCATCATGTTCTTGTCTGGCGGTCAGTCGGAGGTTGAGGCAACGCTGAACCTCAACGCGATGAACCAGGC
GCCGAACCCGTGGCACGTGTCCTTCTCCTACGCGCGGGCGCTGCAGAACACCTGCCTCAAGACGTGGGGCGGGCGGCCGGAGAACGTGGCCGCGGCGCAG
GAGGCGCTGCTGCTGCGCGCCAAGGCCAACTCCCTGGCGCAGCTCGGCAAGTACACCAGCGACGGCGAGGCCGCGGAAGCCAGCGAGAACATGTTCGTCA
AGAACTACAGCTACTGATCCGTCGGCGAGCTGTCTATCTAATAATCTACCGCATCACTGTCAGCCAGTAGCGCCTTGAGCAGCTTGAGGGCGCCTTAGCC
AGCCAGTGGGTCGTCGTTGTTACAGGTCGAGACCAGCTCTGATGGAAGAGATGGACAGAGAGTATATACTGTGTTTTGCCACCCTAAGTAAACTACTTTG
GAATGGTCCTACTGTTGTATTCGCATGGTTTTTTCTAGAGCATTGTTGCCTTTGTTTGCTACCGTAAGTATGAACAATCTGAAGCGCCCCCCCTTTGGAA
CGCGGTAATTTTTCTGAGATATTATTTCTATCGGGTTTGCTATTTCACATCTAGATGTAAAATAACTATCTCGCATTTAAATCTAGAATCGTTGGATTAT
TTGTCTTTAATATTTGTGCAAAATACAATGGTCTAGTTGATGCGCAAAAAAAAAA
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