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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6308  (registered. 2012)
Contig Information
Length 666 bp
Clones alternative view 97 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 3
Wh_dL Crown of seedling 6
Wh_f Spike at flowering date 1
Wh_oh Pistil at heading date 3
Wh_r Root 5
Wh_yd Spikelet at late flowering 5
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 2
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 4
Wh_SHC Shoot grown with cold treatment 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23℃ 1
WH_XR Roots, 18 day old plants were grown hydroponically 7
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_SP 8
WH_XA Root 3
WH_XB Root 8
WH_XC Root, treated at 50 microM Al for 6h 14
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XE Seedling, infected with leaf rust 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XV Leaves, plant was grown at constant 23℃ 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|218192814|gb|EEC75241.1|| hypothetical protein OsI_11539 [Oryza sativa Indica Group]
Score 159
Evalue 2.00E-37
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6308 
TTTTTTTTTTGGACAAACAACTCAATACAGATTAATTTTTTTTTTAAGGGCCAAATCATCAGTATAACAATAAGCAACGAGATAAGGGACATATATCAAG
CATTCAACACAGATTAAACTCAAAACATGTTCACAATAAACCAGGCCAAGTGACATCAAGTCTTAGCTTCCATAGCAGCAACTGAAACCAACCACAGACA
TCCAAGAGCTAGGTAGACATGGGAAGGACACAAGTTCCAGGTAAAACTACTAGCAACATCTAGAGCTGCTTGATCTCAGCCTTCCTCTTCTGCCACAGCC
TGTCCAGGGAGCCATCAGCATCACCCTGAGCACGGACGAACCCAGAGAGAGCAAAGGTGGTGAAGCGGCCATCATAGAGGCCATTCTCATCAACGTGACC
AATGTTGATCTGGACAGAGGCGTGGTCCTTGGCCGTGATGATCCTGTTGGTGGCCGAGCACTTCCTGGGGACGTAGAGGTCCACCATGTCACCCACCTCG
TTCTGCATGACGGCGGCTGGAGGGGGAGTGGCACAACAACAGCGACTTGATCTCTTGGATTCGAGGAGGCGCTGCGGGAGGAGGAAGAGAAGCTGGTGCG
GCGGCGGCGGCGCAAGGGTGTGTGAGGCCGGGACTTTATAGCAGGAGCGGCCAGAGGGAGGGCTCG
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