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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig4554  (registered. 2012)
Contig Information
Length 1466 bp
Clones alternative view 51 Clones [Download: TSV  ,  FASTA ]
Wh_r Root 1
Wh_CSEC Callus 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 1
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 3
Wh_SHDr Shoot grown with dessication 2
Wh_VWD Shoot grown with dessication 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 5
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 3
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_XC Root, treated at 50 microM Al for 6h 3
WH_XE Seedling, infected with leaf rust 3
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115475696|ref|NP_001061444.1|| Os08g0282000 [Oryza sativa (japonica cultivar-group)]
Score 527
Evalue 2.00E-147
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig4554 
GGCTGCAGGAATTCGGCACGAGGCAACGGCGCACCGTCCGTCCGCACTAGGTGGACCCTTTCGCACCCGTCCACCCCTAAGCATCTCCCCTCTCTTTCCC
TCGTCCTCTTCCTCCTTCGATCTCCACGGCAAAGGAAAAGAAAATCCCGTATTAATCAATTTACAGATTGTGCCTGGGGGCTTGATTAGATTGTTTCGAG
ATGGCGGCGTGCCGGGGATTCTTCGAGTGCCTGCTCAGGCTGCTCAACTTTTTCCTCACCGTCGCCGGCCTTGCCATGGTCGGCTACGGGATCTACCTGC
TCGTGGAGTGGATGAGGATCTCCGGCGGTGGCGAAGGGGCACCGCCGTCTCCGGCCCCGCCGGCTGAGTTGCTTACGTTTGGCCGCCCGATGCTCACGGT
CGTGGCCCTTGGAGAAGGAGGCAGTTTCTTCGACAAGCTACCCAAAGCATGGTTCATCTATTTGTTCATTGGTGTTGGTGCTGTTATCTTCATCGTTTCT
CTATTTGGCTGCATTGGAGCAGGGACAAGGAATACGTGTTGCTTGTGTTGTTATTCTTTCTTGGTCATATTATTAATCCTTGCTGAGGCTGGAGGTGCTG
CATTCATATTCTTTGACCATAGCTGGAAAGATGTAATTCCAGTGGATAAGACACAAAACTTTGATGCCATGTATAACTTTCTGAATGAAAACTGGAAGAT
TGCAAGATGGGTTGCTCTTGGTGTTGTTGTTTTTGAGGTATTGCTTTTCTTGTTAGCTCTTGCTGTCAGGGCAATGAACAAACCTGCCGAGTATGACAGT
GATGATGAAATCATTGGAACTGTTCGAAGCACTAGCATCCGTCAGCCTCTTATCCATTCCCAGAATGCTCCGGCTACTGGTGTTCCCGTCCCAACACTTG
ATCAACGTGCGAGCAGAAATGATGCATGGAGCCAAAGGATGCGAGAGAAGTATGGTCTGGACACAAGCCAATTTACTTACAACCCATCAGATGCAACCAG
ATATCAGCAAAATGGGGCACCTCCAGCTGAAGAAAGGAGCCGTTGCATCGTAATGTGAAAATCCTTCACGACGTCATCCAAATTGATGGTTCTTGAACAG
GCCATCTCAGCTTGCACAGTTTGGCTATACCGTGTTGTTCAGAGTGGTGTATGAATAGAGGTCCTTTTACCTTAATGCTCATCTTATCTGCTGTCTTCTG
AACAACTCCATGCACCTGTAATTTTTGTGTGAACGAGTATTGGCCGTTGATATCTCATTATATTTCATGTTTTCCTCGGATTCCTTTTGTTGGCATTCCA
TTTTTGCCCTGTTTACCCTTTCAACTTGTATCATGAACTAGAGTAGATGGTGAACTCCGCTTCGCAGATTGGTCAATGTGTGCTTGATGCGGTTGGTGTT
TAATTTGTTTATGGGTGAGAGAGTGTGCCTGGTGGAGTATGTATGTTGACAATTGAGATCCGTGAT
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