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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig26148  (registered. 2012)
Contig Information
Length 1960 bp
Clones alternative view 41 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 2
Wh_r Root 2
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 1
Wh_V483 Shoot grown under cold condition for 3days 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 4
WH_XN Leaves, plant was grown at constant 23Ž 8
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 6
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XA Root 1
WH_XE Seedling, infected with leaf rust 5
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XV Leaves, plant was grown at constant 23Ž 4
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115448363|ref|NP_001047961.1|| Os02g0721600 [Oryza sativa (japonica cultivar-group)]
Score 836
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig26148 
CGATAACCTAAAATTCAATTTTTGTTTTATTACAAAAGGATAAAAAAGAATAGACGAAAATAGAAACAAAAAGCGGTTGCGGGAGAGGATAAATCCCAGA
ACGGGGAGCGGAAAATAGTCGGAAAAAGATTAATCATTTCTTCCTGCTGTCCGCAAGGGAGAGAAAAAGGGTAGTACGCTCGCCCCGTCCGTCCCTTATA
TTTTCCGGGGGGATCCATCTCCGTTCTGCTTGGGCGGCGTCTTCTGAGGCGCAGGCTTTCCCCCCCTCCGCTCTACCCCGGCGGCCGATTCGCGCCCCCC
TCGCTCGACCCTCCAGGTCAGGGAGGCTTCTCTCCTAGGAGAGGATCAATGTCCAATTATCACGACGATCACGTCGAAGACATGGAGGATGATTATGACA
TGGACGACCCCGCTGAGGACATGGTTGACGCCCACCACGAGCGAGGTTTAAGAGACTCCGATTCGGAGGATGACGAGTATGCCCATTCGAATGATAAGAT
CCCAGATACTTCGGCAGCGGATGCAAGAAAAGGGAAAGACATCCAAGGAATACCATGGGAGAGGCTAGCTATCACAAGGGAAAACTACAGACAGACCAGA
TTAGAGCAGTACAAAAACTATGAGAACATTCCTAATTCTGGAGAAGCAGCAGCCAAGGAATGCAAACCGACTGTGAAAGGTGGAATGTATTATGAATTCA
GACAAAATACTAGATCAGTAAAATCAACCATCCTACATTTTCAGCTGAGAAATTTAGTATGGGCTACATCCAAGCATGACGTCTACCTAATGTCACATTA
CTCAGTGCTTCACTGGTCAGCGTTGAGTGGTGTGGACACTGAACTTATGAATGTCCAAGGTCATGTGGCACCAAGGGAGAAGCACCCTGGAAGTCTATTA
GAGGGTTTTTCTCAGACTCAAGTTAGTACCTTGGCAGTCAAGGACAATTTGCTGGTAGCTGGTGGATTTCAAGGGGAGCTAATCTGCAAGCACCTTGATC
GAGAAGGAATAAGCTTTTGCTGTCGAACAACATATGATGATAATGCTATTACTAATGCAGTTGAGATATTCAATACTGCTAGTGGTGCTGTTCATTTCAT
GGCATCGAATAATGACTCCGGTGTAAGGGATTATGACATGGAGAGATTCCAGTTATGCAAGCACTTTCAGTTTGATTGGCCAGTGAATCATACATCTCTG
AGTCCTGACGGGAAGCTTGTTGTAATTGTTGGGGATGATCCTAATGGTTTACTTATTGATGCCAATTCAGGAAAGACTCTTCATTCCATGAAAGGTCATC
ACGACTTCTCATTCGCATCAGCCTGGAGCCCTGATGGCCGAACGTTTGCTACTGGGAACCAAGACAAGACATGCCGAATCTGGGACGCGAGGAACTTATC
AAAAGCAGTCCATGTATTGAAGGGTAACCTAGGAGCCATCAGATCAATCCGTTTTACGTCGGATGGGCAGTTCCTGTCGATGGCGGAACCAGCGGACTTT
GTCCATATCTTTGATGTGAAGAGCGACTACAATAGAAGGCAAGAGCTAGACTTCTTCGGCGAGATATCTGGGATGTCCTTCAGCCCCGACACAGACGCCC
TCTTCGTCGGCGTGTGGGATAGAACATATGGTAGCCTCCTCCAGTTTGGGCGTCTGTATAACAACTGGTACCATGACTCGCTGCTTTGAGGAGAAAGCGG
AGCGGATGTCGGGCCTGCATGTCTGTCCCCCCACAGCTGCACTGAATCTCGCAGCATAAGTTAGGTGTCTCCCTGAAATCGGAATTTCTCGAGTTGACCT
GCATAATTCAAATTAATAAATGTTGTATCCTTGTATGTGTATAAACAAATGTACAGATGCCTATAGCCTGTGTGCCGGGGTAGAGCGCATCTCATCATAT
ATGTTTAGGTTCCAGTTAGTTGTAAGGCATCTTGACTCAGGTCGAGTGACGCTGTGAACA
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