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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig20922  (registered. 2012)
Contig Information
Length 968 bp
Clones alternative view 80 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 1
Wh_h Spike at heading date 3
Wh_r Root 5
Wh_EMI Dormant seed with water absorption after breaking 3
Wh_KMP Shoot grown under continuous light 1
Wh_MS Seed DPA5 of DT3DL CS wheat 5
Wh_OKCS Seed DPA5 1
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 9
Wh_SHDr Shoot grown with dessication 3
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 4
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 6
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XT Roots, 18 day old plants were grown hydroponically 7
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XA Root 1
WH_XC Root, treated at 50 microM Al for 6h 1
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XE Seedling, infected with leaf rust 4
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|242096828|ref|XP_002438904.1|| hypothetical protein SORBIDRAFT_10g028020 [Sorghum bicolor]
Score 474
Evalue 7.00E-132
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig20922 
GAGGCACAAGTTCAGGGCTCACTTATTCATTCATTTCACAGTTCATCCAAATCTGCTGCGGTCAGAAAGTTCACGGACACAACCAAACATAAGTACATAA
CACTAGACCACAGCACGGTAGCAACAAAGCACAAGACCAGACGAGGACACACTGACAATCCGATCGGAGGACACAGAAAGGCAACCGACTTGTGAGCCCA
CAGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGG
TGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGT
GTCAGATGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCATACCACCCCTGAGACGGAGCACCAGGTGGAGGGTGGAC
TCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCT
GGATCTTCGCCTTCACGTTGTCAATGGTGTCGGATGACTCAACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATACCACCCCT
GAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGC
TGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATTGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGG
TCTTGACGAAGATCTGCATCCCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATG
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