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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig30349  (registered. 2012)
Contig Information
Length 902 bp
Clones alternative view 8 Clones [Download: TSV  ,  FASTA ]
Wh_SHC Shoot grown with cold treatment 1
Wh_VSCB Liquid cultured tissue 1
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115463105|ref|NP_001055152.1|| Os05g0306000 [Oryza sativa (japonica cultivar-group)]
Score 352
Evalue 3.00E-95
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig30349 
TTTTTTTTTTAAATCAGACAATCAGGAAAATAGGCACATCCATAATTCTGAAATTATAAACACATGCACTCATTTGTCAGTCAAGCAATGCTTCTTTGTG
ATTATTAAGAAAAAGTAATGCTTCTAGTACAGATGCATTCATGCATCAGCAAGTCATCGTAAACATATTTGCACACAAAGATACATATTCTGCGCTCGTA
CACCAGTGGGCTACCACGTGTAGTGTATGATCGTTGAAACCCGGCGATTAGAATTGCCGCAAACAGTCGGCAAAAGAATAAGGTTACAACATGGTATAAG
GGCTACTCTGTCTCGGTTACAACCGGAGGCACTGCATCCACCTTGTACCGGAGGGTCTTTTTGAAGAATGTTGAATATGAGTTGTCCCATACAAGCTTGT
ACGATCCAGCGAAAACAGTGCAAAAGTTACCTTGGTCAGCTTCATACCGTCGGTAGGGAAGAATCAACGTTTTCTCCCGTGACGGGCTTATGTACTCCAC
ATGAAAGCCAATATCCAGCAGTGTGCTGAGGGCCCCTTGTTGCAATGAGAAATCCCATGCAATATATGAGTTGACAGCTTCAACACTTAAAATAACCTCA
TGTGTCTTTCCCGCTGGAATAATGGTTTCTCGGTACTCATCGTTTTTCCTCGAATCAGCACCTGCATCCTCAGCAGATATGAAGAATGGGGCATTCACAA
AAACCTCACCGATGAATGTAGTGAACTTCCCAAATTCCTCGGTGTATATAACCACTGCCTGCTGCAACACAGCAATGTCATCCTTCCCTATTTTCTTCTG
TCCATATCGTGCCAAAGAGAGATGTAGATATAACCGAACTGCAAGCACCAGTTTTGTAAGTGTGTATAGTGCTGGCCCATAGCTCTCTCTTTGCACTTCC
AT
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