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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_VHS_all.Contig1401
Contig Information
Length 1373 bp
Tissue Shoot with heat shock treatment
Clones 12 Clones [Download: CSV  ,  FASTA ]
whvh10o06    whvh11g01    whvh3e21    whvh4d06    whvh4l19    whvh6m08    whvh15b22    rwhvh10o06    rwhvh3e21    rwhvh4d06    rwhvh4l19    rwhvh15b22   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os07g0152900 [Oryza sativa (japonica cultivar-group)] >gi|34395056|dbj|BAC84719.1| putative glycolate oxidase [Oryza sativa Japonica Group] >gi|50508805|dbj|BAD31578.1| putative (S)-2-hydroxy-acid oxidase [Oryza sativa Japonica Group] >gi|113610445|dbj|BAF20823.1| Os07g0152900 [Oryza sativa (japonica cultivar-group)] >gi|215678898|dbj|BAG96328.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215692798|dbj|BAG88242.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218199102|gb|EEC81529.1| hypothetical protein OsI_24928 [Oryza sativa Indica Group]
Score 1703
Evalue 0
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_VHS_all.Contig1401 
TCCTTCCTTCCCCTCAGCCTTGAGGGGACAGTCAGCCACAGCCTCCTCATACAAGGTGGTGATTTGCACAGACAAATGGAGATCACCAATGTCACAGAGT
ACCAGGCCATCGCCAAGCAGAAGCTTCCCAAGATGATCTACGACTACTACGCCTCCGGCGCCGAGGACGAGTGGACGCTCCAGGAGAACAGAGAGGCCTT
TGCCAGGATCCTGTTCCGCCCGCGCATTCTCATCGATGTATCCAAAATCGACATGACAACAACTATCCTGGGGTTCAAGCTCTCAATGCCCATCATGATT
TCCCCCACTGCCATGCAGAAGATGGCTCACCCAGATGGAGAGTATGCAACTGCCCGCGCAGCATCAGCAGCAGGCACTATAATGACATTGTCGTCCTGGG
CTACTTCGAGTGTTGAGGAGGTTGCCTCAACCGGACCAGGGATCCGTTTCTTCCAACTCTATGTGTACAAGGACAGGAAGGTGGTCGAGCAGCTTGTGAG
GAGAGCGGAAAAGGCTGGATTCAAGGCGATAGCGCTCACCGTGGACACCCCGCGACTTGGCCGCAGGGAAGCTGATATCAAGAACAGATTTGTTTTGCCA
CCAAATTTGACACTCAAGAACTTTGAAGGTTTGGACCTCGGGAAAATGGACCAGGCTAACGATTCAGGACTAGCTTCATATGTCGCCGGTCAGATCGACC
GCACACTGAGCTGGAAGGATGTGAAGTGGCTGCAGTCCATCACCACGATGCCGATCCTGGTGAAAGGAGTGATCACCGCAGAGGACAGCAGGCTCGCCGT
GGAGAACGGCGCGGCCGGAATCATCGTGTCCAACCACGGCGCCCGGCAGCTGGACTACGTCCCGGCGACCATCAGCGCCCTAGAAGAGGTCGTGAAGGGT
GCTGGCGGGCAGATCCCCGTCTTCCTGGACGGCGGTGTGCGCCGCGGCACCGACGTCTTCAAGGCGCTCGCTCTCGGCGCCGCCGGTGTCTTCATCGGAA
GGCCGGTGGTGTTCTCGCTGGCGGTGGCCGGGGAGGCCGGGGTGAGCAACGTGCTCAAGATGCTGCGCGACGAGTTCGAGCTGACCATGGCGCTCAGCGG
CTGCAACTCGCTGGCCGACATCACCCGCAACCACGTCGTCACCGAGGCCGACAAATTCGGCGTCATGCCGTCCCGCTTGTAACTTGGAACCAAATCAAGT
CGGCGCACGTCGCCGGCGGCCGTATATCGATCCAAGGCTTACGTACGTAACTGCATGGATGCATGATATGCTACGTAGTGTAATTAATTTTGGACGGGAC
GTGTGTGTGTGTGTGTGTGTGTGTTTCCAACTTCCAAAGTGCTGTGATATGGCATGGATCGATCAGACCATGA
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