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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig11398  (registered. 2012)
Contig Information
Length 1380 bp
Clones alternative view 108 Clones [Download: TSV  ,  FASTA ]
Wh_r Root 8
Wh_CSEC Callus 5
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 3
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 1
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_OKCS Seed DPA5 3
Wh_RDr Root of dessiccated seed 2
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 7
WH_XN Leaves, plant was grown at constant 23℃ 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_XA Root 1
WH_XC Root, treated at 50 microM Al for 6h 1
WH_XE Seedling, infected with leaf rust 23
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 11
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 14
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|585032|sp|P38076.1|CYSK_WHEAT|CYSK_WHEAT RecName: Full=Cysteine synthase; AltName: Full=O-acetylserine
Score 624
Evalue 7.00E-177
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig11398 
TTTTTTTTTTGACATGTAAGGGCACCATGATGCTTTATTTCACACTGGCTGACATATGGACCACAGAGGAGGAGTTCAATATACAGGGCAGGCAGGAGGT
AATTCAAATTGCTAAACACCACAAGGCCAACACAAAAGTATTCCCCATTGCCACACAAGGTGGGATTAAAACTTGACAGGACTTTGATGTCAGACCAACA
CTAGCAGGGACGCCGAAGATTTATTTCTTGTAGAAGAGGGCTCCTATGAATGGAGGGATTCGGCTTCGGAGAACAGCTTCGCGCGCTTGAGGAGACGAGT
CCCGAGCGTCACTCGACCACCATGCTCTCGGCCTCCTTCTTGATGGAGTGGAAGAGCACCGACGAAAGGTAGCGCTCTCCGAAGCTCGGGAACACAACAA
CAAAGAGTTTCCCTGCATTTTCAGGCCTCTGAGCAACCTTGATTGCAGCAGCTGCAGCAGCACCAGAAGAGATCCCAACCAGCAATCCTTCTTTCAATGC
AAGAGACTTTGCCATCTCAATAGACTCATCACTTGAAACCTGTATGGTTTCATCAATGATGTCAACATCCAAGACACCAGGGATAAAACCAGCTCCAATT
CCTTGGATCTTGTGTGGTCCAGGCTTTCCACCATTTAAGACAGCACTCTCGGTAGGCTCCACACCGTAGAGCTTGATGTTAGAGTTTTGCTCTTTGAGGT
ACTTTCCAGTTCCAGTAATGGTACCACCTGTCCCGATGCCAGAAACAAGGCCATCGATCTTTCCACCTGTGCCTTTCCAGATTTCAGGCCCAGTTGTCTC
GTAGTGAATCTTTGGGTTGGCAGGATTCTCGAACTGCTGAAGGATGTATGAGTTGGGCGTCTTTGCTGCAAGCTCTTCCGCCTTTTGGACAGCTCCTTTC
ATTCCCAAGAGTGGGTCGGTGAGGATCAGCTCAGCACCAAAGGCCTTCAAGATGATTCTCCTCTCCATACTCATGGAGGCGGGCATTGTGAGTACAAGTC
TGTAACCCTTGGCAGCAGCCATGAAGGCCAGCCCAATGCCTGTGTTGCCACTGGTTGGTTCAATCAGCACACTCTTGCCTGGGACGATGAACCCCTTCTC
CTCCGCGTCGGTGATCATGCTGTACCCAATCCTGTCCTTGACGCTGGAGCAGGGCTCCATGGACTCGAGCTTGGCGGCGACGCGCCCCACGCACCCGTCG
GTCACCTTGTTGAGGTACACCAACGGCGTGTTCCCGATCAGCTCGGTGACATCCTTGGCGATCGCCGGAGTGGACGCCTCCCCCATCCCGCCGTCGACGA
GCGATTTGGCAGCGAAGCGATCCTCCCGGGGCCGGAGCTGGACGAAGTGGCGGCTGTCGCTGGCCTCGTGCCGCCTCGTG
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