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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig24190  (registered. 2003)
Contig Information
Length 1894 bp
Clones 25 Clones [Download: TSV  ,  FASTA ]
Wh_EMC Dormant seed with cold treatment after water absorption 2
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 2
Wh_V4816 Shoot grown under cold condition for 16days 7
Wh_VABA Shoot with ABA treatment 2
Wh_VWD Shoot grown with dessication 4
Homology (BLAST) Top Hit Os02g0611200 [Oryza sativa (japonica cultivar-group)] >gi|6646868|emb|CAB64600.1| S-adenosylmethionine decarboxylase 2 [Oryza sativa (japonica cultivar-group)] >gi|47497185|dbj|BAD19232.1| S-adenosylmethionine decarboxylase 2 [Oryza sativa Japonica Group] >gi|47497608|dbj|BAD19677.1| S-adenosylmethionine decarboxylase 2 [Oryza sativa Japonica Group] >gi|113536935|dbj|BAF09318.1| Os02g0611200 [Oryza sativa (japonica cultivar-group)]
Score 1584
Evalue 7.37684e-174
Total Hit Count 377
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig24190 
TACATTTGCTCATACAGGCTTATTCTTTATATTCATAAACCATGCAGCCAGATGCAGGCATTTCCATACATTCGCTCACACTGGCAGAAAACGCTAACCA
TTTTCACGTCACTTGCCCATAACAGAGTACTAGGACAGGAGCAGGAAAAGGAAATCTAAGAACAAACTGACGCAACAAGCTCATTCAGACCAGCTAGCAT
CACCATCAGGAGCTCTTCATCTTCTTACCAGCCCCCCTCTCATCCTTCTCCTGCGCAGCATCGTCTTCCCAGCAAAGGAAAGCATCCATCTTGCAGCCAG
TAACTAAATTGCCATCAACGTTGCAATTCAGGACAGATCTTGGTGACCCGGTGAAGTCTTCGCCGACAGCAGTGAAGCTCTGGTAGATGAGAGCGCCCCC
GTCAGGCAGCTCCTGGACGACCATGTTGGTACTATCATAGATCCCAACATTCAGCCTCTCCCCCCAGGTGCCAGCAAGGCTGTGACCGCCGAAGATGGTC
ACAGCAACAGAAAATTCAGACGGGCCAAAGGATCTCAGCACCCTCTTGACCAGGTCACCATAGGCCATGGAGGCAGGGTCCAACCCCATGACCTCATAGC
TAGCATAGCTGAAGCCGTCCTCAGGGGTGACATGAATGGTGGAGAAAGCAGAGCCATGGATGGCGTTCATGGAGTAGCCACATGGCTCGAAATCAAAGTC
GCAGATCTCCATCTCCGGGATTATTTCAGAGATGCCAGAGAGCTTGGTCATCTCCTTGGCACAAGATGTGTGGCCATCATCAGAGGTCTTGAAGAAGATA
GAAGCTTTCTTCTTGTCCAGACCAGTCATGCACATCTCAAGGTTGACCACAGGCTGCTCAGGCTGCTGGGTGGCATAGTAGACATGCCACTTCTGGCCTG
GCTTTGCAGGATCACCAATGACATAGGCATTGCCGCCAGACTTGAGTCCACCAAAGAAGCCATTCAGGAAGGCAACCTCGGCAGAGAAGTTCTTGTGTGG
AGAAGGCTGTGCTTCAGGGAATATGAATGTCCCACGGGAGTACTTCACAGCAGCAAGTGGCAGGGACAGCTCCTCAGCAAGCTCAAGAACCCTTGGAATG
GCCAGCAGGAGCTTGGTGGTACCGCAGGTCTTGATCACAACCTTGTACGGGTACACGAAGAGGCTTGATTCAGAAAGGACATACGAGTCAAACTTCTCAT
TGGAGAGCTCAGATACAATGGTGCACTTGGCAAGATCAAGGACCGAGTCGATCTGGGCACGAGAGAGCGCACGCAATCCCCTGCCATTGGGGTCAGTGAA
GACTGGCGCTTCAGAGAAAGTGATCTCCAGGCGTTTCTCATATCCCTCGAACCCAATCGCAGAGACGGCCATTGTTTCAGAAGGTTGGTAGAGGGAGAAA
AGGCTTTGCTGGTCAGAGAAAAGCAGCTAGCAAGAGAAAATTTAGGAAGATGAATTGAAAGGGGAGGGAATTCTAAGCAATTAGGATGGGGCACGAGAGG
GATTATCAGGATGGCTTCCTGGAGCAGTTTGAGTAGGCAGCGGAGCGGAACTTCTCAATGCCGCCTGCAGGGCGGACGTCCTCGATGCTGTAGCCGAGGG
GAGCTTCGTACATGAGGGAGGAACGACTACTGCTGGACTTTTTACCACCCTTGGATTCCATAGCACATCAAATTAGTTCCAGGAAGAACTTCGGAGGCGC
GCGTCGAATCCGCTCGTCACAAACCTCGAGCTGGGAGCAAGCGACGGATCTGTCTCTCCCCCTCCTCACGGATCTCCAAAAAACGAAAGCAAACGGACGA
ACACAATCTCACTCCGAATTTCTAGGTTTTGGACGAGATGGTGGTGGGGAACGAACGGAGTTTGCGTTTGTGCTAAATAAACAAATGAGGCGAC
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