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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig7110  (registered. 2012)
Contig Information
Length 1157 bp
Clones alternative view 23 Clones [Download: TSV  ,  FASTA ]
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_V4816 Shoot grown under cold condition for 16days 3
Wh_VABA Shoot with ABA treatment 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 6
WH_SP 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115488536|ref|NP_001066755.1|| Os12g0476200 [Oryza sativa (japonica cultivar-group)]
Score 403
Evalue 2.00E-110
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig7110 
GAGAGCTCCTCTCCAAACCTCTCCCTTCTCCCCGCCAGGAGTCTAGGGTTAGAGAGAGAGAGAGAGAGTGAGACAAGAGCAAAAATAATCTCTCGCCCCA
CTGTTATACCAAGGTTGCATCCATCTCATATCCCTCTATATATCTTTGTATCACGATGGCTGGCCTATCCCTAGAGCACCCTTGGGCATTCGCCTTCGGC
CTCCTAGGCAACATCATCTCTTTCACAAGCCTCCTGGCCCCCATACCAACATTCTACCGGATCTTCAAGAGCAAATCCACGGAGGGGTTCCAGTCGGTGC
CCTACGTCGTGGCCCTGTTCAGCGCGATGCTGTGGATCTTCTACGCACTTGTCAAGACCGGTGAGGGCCTCCTCATCAGCATCAATGCTGCCGGCTGCGT
CATCGAGACAGTCTACATCGTCATGTACCTCGTCTACGCCCCCAGGAAGGCCAAGATTTTCACAGCCAAGATCGTCGTCCTCCTCAACGTCGCCGGCTTC
GGGCTCATCCTCCTCCTCACCCTCTTCGCCTTCCACGGCGAGACACGCGTCATCTCGCTCGGCTGGATCTGCGTCGGCTTCTCCGTCTGCGTCTTCGTTG
CCCCACTCAGCATCATCGGACGAGTCATCAAGACCAAGAGTGTGGAGTACATGCCCTTCTCCCTCTCCCTCACGCTCACCCTCAGCGCCGTCGTCTGGTT
CCTCTACGGCCTGCTCATCAAGGACAAATACGTGGCGCTCCCAAACATCCTTGGCTTCACCTTCGGGATGATCCAGATGGTCCTCTACATGTTCTACATG
AACGCAACGCCGGTGGTGAGCGATCTGAAGGAGGGGAAAGAGGGGCTGAAGATGTCGGCGGAGGAGCACGTGGTGGTGATCAACGTTGGCAAGAGCGAAA
AGAGCTCTGGCGCCGTGGTTCGCCCGGTCACCGAGATGGTCAAAGCCGTCCCGGCGGCGCCGGGGCAACAAGTGATGGCGCTGGACTCTGCCCGCTCTGT
CGATGTGGTGTAAATTCACGCATGCAGGCTTGCCTCATGCATGAGTTCGTGCAAGCTTTAATATTCGTGCAGCTTTTTTGGAGGGTCACGCCTGCAGGGC
ATGCATGATGCTTCTTTTCTGTTAGATCAACATGTTGATTGTATGAGGCATAAGCCA
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