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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig8817  (registered. 2012)
Contig Information
Length 748 bp
Clones alternative view 146 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 16
Wh_dL Crown of seedling 14
Wh_e Seed DPA10 2
Wh_h Spike at heading date 4
Wh_oh Pistil at heading date 1
Wh_r Root 2
Wh_yd Spikelet at late flowering 4
Wh_CSEC Callus 3
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 2
Wh_MS Seed DPA5 of DT3DL CS wheat 6
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 6
Wh_SHC Shoot grown with cold treatment 7
Wh_V483 Shoot grown under cold condition for 3days 4
Wh_VSCB Liquid cultured tissue 8
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23℃ 4
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 5
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_SP 2
WH_XA Root 11
WH_XB Root 10
WH_XC Root, treated at 50 microM Al for 6h 13
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|57471718|gb|AAW50990.1|| ribosomal protein P1 [Triticum aestivum]
Score 213
Evalue 2.00E-53
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig8817 
ATCAGCTGCAACACCATAATTAATCAACGAGACACNTTTTTTTTTTAAAAAGCTACAGGCAGTCATCCAAGCACAGAGCATAGAAAACTGGTGACAACAT
AATCAGTAACTGACCAGAAAAAGGAAAACATGCACCATTTTTTTTTTAAACATAATGTAGAACCATTTTCATTCTAACAAGACCATCCCAAGGAGGTTTT
GCAGTACTCATTGCACAGATACTTAGTCTCAAACAGCATAACATAATAAATCTTCAAAATTCGACCTAAAAGCACATAAGACAAGTCTTTCGCATAGAAG
AACCCACAGGAGAACTGGAATTGAACAGCTTAGTCGAACAAGCTGAAGCCCATGTCATCATCGCTCTCTTCCTTGGCCTCTTCTTTCTTTTCTTCCTTCT
TCTCTTCAGCGGCAGCAGCACCACCAGCAGCCGGGGCAGCAGCAGCAGCAGCTGGAGCACCACCTCCACCAGATCCGACGGAAAGGATGAGGTCATCGAC
GCTCCTCTTCTCCAGGAGCTTGGCGAAGAGCGCGGGCCAGTAGGCCTCAACCTTGATTCCGGCAGCCTTCACCACCGTCGCGATCTTCTCGGAAGTGATG
GGGATCCCGTCATCGTGGAGGATGAGGGCGGCAAGGGTGCAGGCGACCTCGCTGGAAGACATGGCGACGGATTCTCACCGGAGCGGATCTGCGATCTTGG
GGAGGCGATGGAAGTGGAGGCGCAGGAGGCAGGCACGAGCCCTCGTGC
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