Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig18716  (registered. 2012)
Contig Information
Length 1204 bp
Clones alternative view 658 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 11
Wh_h Spike at heading date 5
Wh_SH - 19
Wh_KMP Shoot grown under continuous light 29
Wh_KMV Shoot grown with continuous light after cold treatment 10
Wh_OKCS Seed DPA5 2
Wh_PCDAM Anther at meiosis 3
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 17
Wh_VABA Shoot with ABA treatment 22
Wh_VHS Shoot with heat shock treatment 88
Wh_VWD Shoot grown with dessication 19
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 25
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 36
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 19
WH_XN Leaves, plant was grown at constant 23Ž 20
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 14
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 38
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 79
WH_XE Seedling, infected with leaf rust 37
WH_XF Seedling, infected with leaf rust 70
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 27
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 23
WH_XV Leaves, plant was grown at constant 23Ž 8
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 7
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 20
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|11990901|dbj|BAB19814.1|| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit"
Score 358
Evalue 6.00E-97
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig18716 
TTCATCAAACATTCATTCATTCAGCAACCATACTACAATCCAAGACACAATTCATACTTTAGCATCATCATTTTCTTCTTGTTTCATTCAGTCGCGCTTC
CTGTCCCTGTCTCTATCCCTCCTTGTGGAGGGCGACCTCGAGCGGTCCCTTGACGACCTGCTGGAACGGCGTGGAGAACGGCTCCTCCGCGGTTCCACTC
GGGAGCGCCCGCCTCTCGGACCACAGTATTCTCCAGGGGTAGGGGTCCTCTCACGAGTTCTCTTTGCCTTTGCCACACTGATGAGGCGGCCTTCAAGGAC
AGTACGGTGCAGGTACTTGATGCAGCGCCTGCCACCTTCTCTCCTCCAACACCATGGCCCCCACTGTGATGGCTTCCTCGGCCACCTCCGTCGCACCCTT
CCAGGGTCTCAAGTCGACCGCCGGCCTGCCCATCAGCCGCCGCTCCAGCAGCGCCGGCCTCAGCAGCGTCAGCAACGGCGGAAGGATCAGGTGCATGCAG
GTGTGGCCGATTGAGGGCATCAAGAAGTTCGAGACCCTGTCTTACCTGCCACCCCTCTCCACGGAGGCCCTCCTGAAGCAGGTCGACTACTTGATCCGCT
CCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTTGGTTTCGTCTTCCGTGAGCACAATAGCTCCCCCGGATACTATGACGGTCGATACTGGACAATGTG
GAAGCTGCCTATGTTCGGGTGCACCGACGCCACACAGGTGCTCAACGAGGTGGAGGAGGTCAAGAAGGAGTACCCTGACGCCTATGTCCGCGTCATCGGC
TTCGACAACCTGCGCCAGGTGCAGTGCGTCAGCTTCATCGCCTTCAGGCCACCGGGTTGCGAGGAGTCTGGCAAGGCCTAAACTACGAGTTGAAACAATG
GCCTATGTATGAAGGTCTTTTGTGAACGTCACTTTTGTCCACGACTCTGCTGGACGACCAGAGCATATTTTTCATTCTATATGGTCTGTGTATGTATGTA
CGAACATAGGTTCTCGAGCATGCATATGCAAATTCTAGAACCGGCTACACATATACAAAACCTGTGTGATATTTATTATATACAACACGCGGACCATTGT
CTTGCTGTTATTAATTCAAAAAAAAGGTTCTTTATTTGGCACTGCAATGAATATGTCTCACAACTAGTTGTGGAAGCATTCAGTATTTGACATTAAAAAA
AAAA
page-top