Contig Information
|
Length
|
1635
bp
|
Clones
|
|
83 Clones
[Download:
TSV
,
FASTA
]
Wh
|
Spike at meiosis
|
9
|
Wh_SL
|
Seed DPA30
|
10
|
Wh_dL
|
Crown of seedling
|
7
|
Wh_e
|
Seed DPA10
|
6
|
Wh_f
|
Spike at flowering date
|
2
|
Wh_h
|
Spike at heading date
|
9
|
Wh_oh
|
Pistil at heading date
|
4
|
Wh_r
|
Root
|
9
|
Wh_yd
|
Spikelet at late flowering
|
20
|
Wh_yf
|
Spikelet at early flowering
|
7
|
|
Assemble Result
|
Assemble Viewer
|
Homology (BLAST)
|
Top Hit
|
Os03g0821100 [Oryza sativa (japonica cultivar-group)] >gi|29124135|gb|AAO65876.1| heat shock protein cognate 70 [Oryza sativa (japonica cultivar-group)] >gi|108711797|gb|ABF99592.1| Heat shock cognate 70 kDa protein 2, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113550195|dbj|BAF13638.1| Os03g0821100 [Oryza sativa (japonica cultivar-group)] >gi|125588425|gb|EAZ29089.1| hypothetical protein OsJ_012572 [Oryza sativa (japonica cultivar-group)] >gi|215697587|dbj|BAG91581.1| unnamed protein product [Oryza sativa Japonica Group]
|
Score
|
2043
|
Evalue
|
0
|
Total Hit Count
|
500
|
Registered year
|
2002
|
Contig Sequence
[ Download ]
|
>Contig16221
ttttttttttacAGCCAAATTTAAGCTCTAAG*AATTCAGAATGAAATCACAGGTGTAGGTAGTACAAACAATAAG*CATTAAGCTGAAATCAACAATGA
G*CCAAAACATGCATCATTGCATTGTTTACGACACTGATGCTACAG*ACCAAAAGTACAACAA*AACTTCCAGCCCAGGTGATATGATTGGCACCCAGG*
ACTGAATCAAATGGCGTATATGAAAGCGACTAACTTAGTCGACCTCCTCGATCTTGGGGCCAGCACCGCCGCTGGCAGCCGGCGCGTCCTCGTCCATGCC
TCCCGGCATGTCAGCACCAGC*GCCCTGGTACATCTTGGCGATGATGGGGTTGCAGAGGCC*CTCCAGCTCCTTCATCTTGTCCTCGAACTCGTCAACCT
CACCAAGCTGGTT*GGCGTCAAGCCACTGGATCGCAGCGTCGACAGCGTCCTCGATC*TT*CTT*CTTGTCGTCAGCGGGCAGCTTGGAGGCGATCTTCT
CGTCCTGGATGGTGTTCCTCATGTTGTAGGCGTAGTTCTCCAGGGAGTTCTTGGCGTCAACCTTCTTCTTGTGCTCCTCGTCCTCAGACTTGTACTTCTC
TGCGTCCTGGACCATCTTCTCAATGTCGTCCTTGCTCAGCCTGCCCTT*GTCGTTGGTGATGGTGATCTTGTTCTTCTGGCCAGTGGTCTTGTCCTCAGC
AGAGACATTCAGGATACCGTTGGCATCAATGTCGAAGCAGACAGTGATCTGGGGAACACCCC*TGGGTGCAGGCGGGATGCCGGAGAGCTCAAACTTGCC
GAGCAGGTTGTTGTCCCTGGTCCTTGTCCTCTCACCCTCAAACACCTGGATGAGCACACCAGGCTGGTTGTCGGAGTAGGTGGAGAAGACCTGCTCCTTC
TTGGTGGGGATGGTGGTGTTCCTGGTGATGAGCACAGTCATGACTCCTCCAGCAGTCTCAAGACCAAGAGACAGTGGGGTCACATCGAGGAGGAGAAGGT
CCTGCACCTTCTCGTTCCCCTCACCGCTGAGGATTGCAGCCTGCACGGCAGCACCGTAGGCAACAGCTT*CATCAGGGTTGATGCT*CTTGCAGAGCTCC
TTCCCGTTGAAGAAGTCCTGCA*GCAGCTGCTGAACTCTGGGGATCCT*GGTGGAACCACCAACAAGCACGACATCATGGATAGTGCTCTTGTCCATCTT
GGCATCCCTCAGGCACTTCTCCACTGGCTCCATGCACTTCCTGAAGAGGT*CCATGTTGAGCTCCTCAAA*CCTGGCCCTGGTGATGGTGGAATAGAAAT
CAACTCCCTCAAAGAGTGAATCGATCTCAATGGTGGTTTGGGCAGTGGAAGAAAGGGTCCTCTTCGCCCTCTCACAAGAAGTCCTGAGCCTTCTCAAAGA
CCTGGGGTTTCCACTGATATCCTTCTTGTGCTTCCT*CTTGAACT*CTTGGACAAAGTGGTTCACCATACGGTTGTCAAgaccataggcaattgcagctg
ctgttggctcgttgatgatacgcatcacattaagaccagcaataacaccggcatccttggttgcctgcctctgggaatcattgaagtaagcaggcacggt
gacaacagcattgcttaatagttacttcctaggta
|